Table 3.
Pathway namea | Pathway ID | Pathway uploaded gene count | Genes in InnateDB for this entity | Pathway p-value | Pathway p-value (corrected) | Gene symbols |
---|---|---|---|---|---|---|
Ribosome | 474 | 17 | 87 | 2.89E-23 | 1.53E-22 | RPL10; RPL10A; RPL13; RPL14; RPL15; RPL18; RPL23; RPL27A; RPL31; RPL4; RPL5; RPL7; RPS16; RPS19; RPS3; RPS3A; RPSA |
Oxidative phosphorylation | 576 | 4 | 131 | 6.09E-05 | 2.31E-04 | COX7A1; NDUFB10; NDUFS1; SDHB |
Glycolysis/Gluconeogenesis | 414 | 4 | 64 | 3.51E-04 | 0.001 | ALDH7A1; HK2; PKM2; TPI1 |
Metabolic pathways | 4373 | 15 | 1115 | 4.20E-04 | 0.001 | ALDH7A1; ANPEP; ASAH1; ATP6V1C1; ATP6V1H; HIBADH; HK2; MGAM; NDUFB10; NDUFS1; PGD; PKM2; SDHB; SUCLA2; TPI1 |
Galactose metabolism | 407 | 2 | 27 | 0.009 | 0.021 | HK2; MGAM |
Citrate cycle (TCA cycle) | 464 | 2 | 30 | 0.011 | 0.021 | SDHB; SUCLA2 |
Propanoate metabolism | 472 | 2 | 32 | 0.012 | 0.023 | ALDH7A1; SUCLA2 |
Fructose and mannose metabolism | 548 | 2 | 35 | 0.015 | 0.025 | HK2; TPI1 |
Carbohydrate digestion and absorption | 10389 | 2 | 41 | 0.020 | 0.031 | HK2; MGAM |
Pyruvate metabolism | 450 | 2 | 40 | 0.019 | 0.031 | ALDH7A1; PKM2 |
Valine, leucine and isoleucine degradation | 453 | 2 | 44 | 0.023 | 0.034 | ALDH7A1; HIBADH |
Amino sugar and nucleotide sugar metabolism | 466 | 2 | 48 | 0.027 | 0.035 | CHIT1; HK2 |
Glutathione metabolism | 534 | 2 | 48 | 0.027 | 0.035 | ANPEP; PGD |
Starch and sucrose metabolism | 536 | 2 | 49 | 0.028 | 0.036 | HK2; MGAM |
Epithelial cell signaling in infection | 420 | 2 | 54 | 0.033 | 0.040 | ATP6V1C1; ATP6V1H |
RNA transport | 10361 | 3 | 149 | 0.044 | 0.052 | EIF3E; EIF3I; PABPC1 |
RNA degradation | 5710 | 2 | 68 | 0.050 | 0.056 | HSPD1; PABPC1 |
Lysosome | 4356 | 2 | 121 | 0.135 | 0.143 | ASAH1; ATP6V1H |
Phagosome | 10394 | 2 | 145 | 0.180 | 0.187 | ATP6V1C1; ATP6V1H |
aData from Table 1 were utilized to run a hypergeometric algorithm following a Benjamini-Hochberg correction for significance. Pathways not relevant to mosquito metabolism were deleted from the analysis