Table 4. Average number of SNPs reaching the specified p-value threshold per data set.
| p-value threshold | BD | CAD | CD | HT | RA | T1D | T2D |
|---|---|---|---|---|---|---|---|
| p < 10−8 | 1.0 | 3.4 | 3.2 | 1.0 | 60.5 | 102.8 | 1.4 |
| p < 10−7 | 1.3 | 4.3 | 4.9 | 3.5 | 73.6 | 123.5 | 2.2 |
| p < 10−6 | 3.8 | 8.0 | 11.3 | 6.4 | 89.5 | 153.5 | 5.4 |
| p < 10−5 | 22.9 | 23.1 | 40.9 | 22.2 | 126.0 | 212.7 | 20.2 |
| p < 10−4 | 149.7 | 129.0 | 221.2 | 131.5 | 280.8 | 391.9 | 132.5 |
| p < 10−3 | 1238.3 | 1047.9 | 1560.0 | 1081.5 | 1332.0 | 1398.3 | 1115.4 |
Average number of SNPs reaching the specified p-value thresholds for at least one of the tests for genome-wide association. Numbers are averaged over all 10 results of the 5 × 2 cross-validations and rounded to one decimal place.