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. 2015 Aug 18;10(8):e0135891. doi: 10.1371/journal.pone.0135891

Table 1. Bacterial strains and plasmids used in this study.

Strain or plasmid Properties Reference
S. diastaticus var. 108 Wild-type (WT); CE-108 and rimocidin producer. [19]
S. diastaticus var. 108/PM1-709B WT derivative with rimJ disrupted by integration of PM1-709B. This work
S. diastaticus var. 108::PM1-709B/860 WT derivative with rimJ disrupted by integration of PM1-709B and transformed with pSM860. This work
S. diastaticus var. 108/780 WT derivative by transformation with pSM780. CE-108 and rimocidin producer. This work
S. diastaticus var. 108/781 WT derivative by transformation with pSM781. Rimocidin producer as majority polyene. This work
S. lividans TK21 General cloning host [37]
S. lividans TK21/pSM858 S. lividans TK21 WT derivative transformed with pSM858 plasmid [32]
E. coli JM101 General cloning host [38]
Penicillium chrysogenum ATCC10003 Antifungal activity assays ATCC
Aspergillus niger ATCC1004 Antifungal activity assays ATCC
Issatchenkia orientalis CECT 1688 Antifungal activity assays CECT
Filobasidiella neoformans CECT 1078 Antifungal activity assays CECT
PM1-709B 1.8 kb XhoI-BglII fragment from pGAe-1 [16] carrying the ermE gene and 840 bp BamHI-SacI internal fragment of rimJ cloned into the XhoI/SacI sites of PM1 phage [40]. This work
pSM859 HindIII-EcoRI fragment from pSM858 (carrying oriT and pcsA under the control of ermE P*) cloned into the HindIII/EcoRI sites of pIJ2925 [37]. This work
pSM860 BglII-EcoRI fragment from pSM859 (carrying oriT and pcsA under the control of ermE P*) cloned into the BamHI/EcoRI sites of pIJ922 [42]. This work
pSM780 pHJL401 [41] derived vector carrying the ermE P* promoter from pIJ4090 [37] and oriT. [32]
pSM781 17,866–16,005 bp fragment from the sequence deposited under accession number AY442225 isolated as BamHI present in the oligonucleotide CCR-D (CGGGATCCCGCCTTTTCCGGAGGC, 17849–17866 bp from AY442225) and Ecl136II of the chromosome cloned into the BamHI-Ecl136II sites of pSM780. This plasmid carries rimJ under the control of the ermE P* promoter. This work

ermE P*: constitutive erythromycin-resistance promoter where the asterisk signifies the presence of a one-base-pair mutation [43].