Table 3. Detailed Results obtained including demoraphic, drug-resistance and genotyping information on 5 clusters including 11 isolates defined by 24-loci MIRU patterns from 75 M.tuberculosis strain isolated in Morocco.
ID | Year of Isolation | Sex | Age | City | Site of Infection | Spoligotype Description | Cluster(SIT/Clade) | MIRU24 profil | Cluster/MLVA MtbC15-9 |
---|---|---|---|---|---|---|---|---|---|
17 | 2011 | M | 19 | Rabat | Pulmonary | ▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▫▪▫▫▫▫▪▪▪▪▪▪▪ | Cluster A(50/H3) | 233235322634425154233432 | Cluster A1(9927–415) |
79 | 2012 | M | 31 | Rabat | Pulmonary | ▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▫▪▫▫▫▫▪▪▪▪▪▪▪ | Cluster A(50/H3) | 233235322634425154233432 | Cluster A1(9927–415) |
26 | 2011 | M | 20 | Sale | Extrapulmonary | ▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▫▫▫▫▪▪▪▪▪▪▪▪▫▫▫▫▪▪▪▪▪▪▪ | NC (ST42/LAM9) | 134243352324126153332932 | Cluster B1(358–51) |
16 | 2011 | M | 31 | Rabat | Extrapulmonary | ▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▫▪▫▫▫▫▪▪▪▪▪▪▪ | NC (ST50/H3) | 1342243352324126153332932 | Cluster B1(358–51) |
51 | 2011 | F | 36 | Oujda | Pulmonary | ▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▫▫▫▫▪▪▪▪▪▪▪ | NC (ST53/T1) | 2432443323344251533431032 | Cluster C1(Unk-15) |
58 | 2011 | M | 24 | Sale | Pulmonary | ▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▫▫▫▫▪▪▪▪▪▪▪▪▫▫▫▫▪▪▪▪▪▪▪ | NC (ST42/LAM9) | 2432443323344251533431032 | |
166 | 2012 | F | 26 | Meknes | Pulmonary | ▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▫▫▫▫▪▪▪▪▪▪▪▪▫▫▫▫▪▪▪▪▪▪▪ | Cluster B(ST42/LAM9) | 244244321322225172346522 | ClusterD1(10248-Unk) |
168 | 2012 | F | 20 | Meknes | Pulmonary | ▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▫▫▫▫▪▪▪▪▪▪▪▪▫▫▫▫▪▪▪▪▪▪▪ | Cluster B(ST42/LAM9) | 244244321322225172346522 | ClusterD1(10248-Unk) |
169 | 2012 | M | 19 | Sidi Kacem | Pulmonary | ▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▫▫▫▫▪▪▪▪▪▪▪▪▫▫▫▫▪▪▪▪▪▪▪ | Cluster B(ST42/LAM9) | 244244321322225172346522 | ClusterD1(10248-Unk) |
22 | 2011 | M | 40 | Fes | Pulmonary | ▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▫▫▫▫▪▪▪▪▪▪▪ | Cluster C(ST53/T1) | 223234332334425153333712 | Cluster E1(13387–15) |
23 | 2011 | F | 31 | Fes | Pulmonary | ▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▪▫▫▫▫▪▪▪▪▪▪▪ | Cluster C(ST53/T1) | 223234332334425153333712 | Cluster E1(13387–15) |
ID: Identifying number
MLVA-MtbC15-9: Multi Locus Variant Allele-Mycobacterium tuberculosis complex15-9