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. 2015 Aug 20;6:610. doi: 10.3389/fpls.2015.00610

Table 1.

Summary of RNA-seq and de novo assembly of Zoysia japonica Steud.

A: STATISTICS OF OUTPUT SEQUENCING
Sample ID Clean reads Raw reads GC (%) N (%) Q20% CycleQ20% Q30%
CK 24905482 5028905784 55.93 0.02 89.12 100.00 80.76
CASE 27691310 5593229543 55.87 0.02 89.20 100.00 80.89
B: STATISTICS OF ASSEMBLY QUALITY
Contigs Unigenes
Total length (nt) 144,962,078 36,384,486
Total number (nt) 719,182 32,849
N50 243 1781
Mean length (nt) 201.56 1107
100–200 bp 592,688 (82.41%)
200–500 bp 83,393 (11.59%) 12,350 (37.59%)
500–1000 bp 23,577 (3.27%) 7276 (22.15%)
1000–1500 bp 8688 (1.20%) 4560 (13.88%)
1500–2000 bp 4933 (0.68%) 3439 (10.47%)
2000+ 5903 (0.82%) 5224 (15.90%)