1 |
blaOXA-51 F |
5′-TAA TGC TTT GAT CGG CCT TG |
353 bp |
Initial denaturation at 94 °C for 5 min, followed by 30 cycles of 94 °C for 25 s, 52 °C for 40 s and 72 °C for 50 s, and a final elongation at 72 °C for 6 min |
2 |
blaOXA-51R |
5′-TGG ATT GCA CTT CAT CTT GG |
3 |
blaOXA-23-F |
5′-GAT CGG ATT GGA GAA CCA GA |
501 bp |
4 |
blaOXA-23-R |
5′-ATT TCT GAC CGC ATT TCC AT |
blaCTX-M genes |
7 |
Group 1-F |
5′-AAA AAT CAC TGC GCC AGT TC |
415 bp |
Initial denaturation at 94 °C for 5 min, followed by 30 cycles of 94 °C for 25 s, 52 °C for 40 s and 72 °C for 50 s, and a final elongation at 72 °C for 6 min |
8 |
Group 1-R |
5′-AGC TTA TTC ATC GCC ACG TT |
9 |
Group 2-F |
5′- CGA CGC TAC CCC TGC TAT T |
552 bp |
10 |
Group 2-R |
5′-CCA GCG TCA GAT TTT TCA GG |
11 |
Group 9-F |
5′-CAA AGA GAG TGC AAC GGATG |
205 bp |
12 |
Group 9-R |
5′-ATT GGA AAG CGT TCA TCA CC |
13 |
Group 8F |
5′-TCG CGT TAA GCG GAT GAT GC |
666 bp |
14 |
Group 8R |
5′-AAC CCA CGA TGT GGG TAG C |
15 |
Group 25F |
5′-GCA CGA TGA CAT TCG GG |
327 bp |
16 |
Group 25R |
5′-AAC CCA CGA TGT GGG TAG C |
1 |
TEM-F |
5′-CATTTCCGTGTCGCCCTTATTC |
800 bp |
Initial denaturation at 94 °C for 10 min, followed by 30 cycles at 94 °C for 40 s, 60 °C for 40 s, and 72 °C for 1 min, and a final elongation step at 72 °C for 7 min |
2 |
TEM-R |
5′-CGTTCATCCATAGTTGCCTGAC |
3 |
SHV-F |
5′-AGCCGCTTGAGCAAATTAAAC |
713 bp |
4 |
SHV-R |
5′-ATCCCGCAGATAAATCACCAC |
1 |
16S rRNA 8F |
5′-GCG GAT CCG CGG CCG CTG CAG AGT TTG ATC CTG GCT CAG |
797 bp |
Initial denaturation at 94 °C for 5 min, followed by 35 cycles at 94 °C for 60 s, 55 °C for 30 s, and 72 °C for 60 s, and a final elongation step at 72 °C for 7 min |
2 |
16S rRNA 805R |
5′-GCG GAT CCG CGG CCG CGG ACT ACC AGG GTA TCT AAT |