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. 2015 Aug 20;12:128. doi: 10.1186/s12985-015-0359-4

Table 2.

Top 50 miRNAs significantly up- or downregulated in PK-15 cells in order of fold change (FC)

Annotation Normalized read counts length type FC Number of target genes
infected control
ssc-miR-10b 42,588 1162 22 Up 36.35 738
ssc-miR-192 3769 102 21 Up 33.74 718
ssc-miR-20a 2432 116 22 Up 19.38 1490
ssc-miR-296-3p 195 3 21 Up 15.77 1863
ssc-miR-novel-chr17-18987 195 3 19 Up 15.77 1864
ssc-miR-92b-3p 2215 133 22 Up 15.56 1757
ssc-miR-30a-5p 98,034 6320 22 Up 15.49 1147
ssc-miR-novel-chr12-7961 1886 191 22 Up 9.43 1357
ssc-miR-novel-chr14-13888 582 58 23 Up 8.71 1368
ssc-miR-34a 358 37 22 Up 7.83 1663
ssc-miR-novel-chr16-17559 55 0 22 Up 6.5 1610
ssc-miR-novel-JH11865-1-42 55 0 23 Up 6.5 1727
ssc-miR-17-5p 2868 438 23 Up 6.42 1443
ssc-miR-16 11,873 1891 22 Up 6.25 1763
ssc-miR-22-3p 2267 365 22 Up 6.07 1487
ssc-miR-146b 75 3 21 Up 6.07 1139
ssc-miR-155-5p 426 62 22 Up 6.06 1146
ssc-miR-novel-chr2-20965 52 1 23 Up 5.64 1147
ssc-miR-novel-chrx-40705 758 147 22 Up 4.89 811
ssc-miR-221-3p 758 147 22 Up 4.89 811
ssc-miR-301 114 17 23 Up 4.59 1509
ssc-miR-191 741 156 23 Up 4.52 695
ssc-miR-novel-chr6-31692 46 3 22 Up 4.30 2019
ssc-miR-181a 637 147 24 Up 4.12 1221
ssc-miR-18a 88 9541 22 Down 0.0102 995
ssc-miR-novel-chr9-37990 20 1752 23 Down 0.0170 1512
ssc-miR-novel-chr9-39041 20 1752 23 Down 0.0170 1512
ssc-miR-novel-chr6-30729 13 1317 22 Down 0.0173 1083
ssc-miR-424-5p 33 2182 22 Down 0.0196 1817
ssc-miR-31 55 3118 22 Down 0.0208 1149
ssc-miR-novel-chrX-41190 0 431 21 Down 0.0227 335
ssc-miR-novel-chr11-6750 7 547 18 Down 0.0305 1406
ssc-miR-152 332 9880 21 Down 0.0346 1161
ssc-miR-542-5p 0 277 21 Down 0.0348 732
ssc-miR-499-5p 7 472 21 Down 0.0353 974
ssc-miR-142-3p 0 238 22 Down 0.0403 887
ssc-miR-135 0 235 23 Down 0.0408 1602
ssc-miR-194a 13 541 21 Down 0.0417 842
ssc-miR-361-5p 20 704 22 Down 0.0420 867
ssc-miR-185 59 1621 22 Down 0.0423 2285
ssc-miR-193a-5p 0 201 22 Down 0.0474 1142
ssc-miR-novel-chr5-29676 0 199 23 Down 0.0478 1066
ssc-miR-183 156 3132 23 Down 0.0528 1087
ssc-miR-29c 16 366 22 Down 0.0691 1120
ssc-miR-novel-chr5-29857 42 736 19 Down 0.0697 1711
ssc-miR-29a 267 3939 23 Down 0.0701 1079
ssc-miR-19a 498 6339 23 Down 0.0800 1436
ssc-miR-19b 1161 14,587 23 Down 0.0802 1299
ssc-miR--novel-chr13_10861 169 1483 22 Down 0.1199 857
ssc-miR-21 52,611 382,830 22 Down 0.1374 789