Table 4. Estimates of haplotype and nucleotide diversity in western gray foxes (mainland), island foxes, and eastern gray foxes from the present study, compared to those from Bozarth et al. (2011) for reference using 406 bp of D loop sequence common to both studies.
Sample | Subsample | n | Putative age | Haplotype diversity (SD) | Nucleotide diversity (SD) | Reference |
---|---|---|---|---|---|---|
Island foxes | 11 | Holocene | 0.691 (0.086) | 0.049 (0.0011) | This study | |
Western | 107 | Pleistocene | 0.865 (0.019) | 0.0083 (0.0003) | This study | |
W. Cascades | (14) | 0.703 (0.095) | 0.0057 (0.0010) | This study | ||
North Coast | (34) | 0.606 (0.091) | 0.0036 (0.0010) | This study | ||
Central Coast | (10) | 0.644 (0.152) | 0.0180 (0.0046) | This study | ||
W. Sierra/SJV | (13) | 0.756 (0.070) | 0.0110 (0.0047) | This study | ||
Sacramento V | (27) | 0.892 (0.025) | 0.0085 (0.0004) | This study | ||
Southeast | 27 | Pleistocene | 0.846 (0.027) | 0.0134 (0.0010) | This study | |
Southeast | 158 | Pleistocene | 0.887 | 0.0099 | Bozarth | |
Northeast | 71 | Holocene | 0.527 | 0.0020 | Bozarth |
Local estimates are also provided for 5 sampling locations within the western mainland population.