Table 3. Comparison of the RNAs and deduced proteins of MVBaV with those of other Tospoviruses.
M RNA | Full length | 5'UTR | NSm | IGR | GPs | 3'UTR | ||||
---|---|---|---|---|---|---|---|---|---|---|
nt | nt | nt | aa | Identity (%) | nt | nt | aa | Identity % | nt | |
WSMoV serogroup | ||||||||||
MVBaV | 8905 | 241 | 8634 | 2877 | 30 | |||||
WSMoV | 8917 | 248 | 8637 | 2878 | 85.8 | 32 | ||||
GBNV | 8911 | 245 | 8634 | 2877 | 84.9 | 32 | ||||
WBNV | 8916 | 247 | 8637 | 2878 | 84.6 | 32 | ||||
CaCV-AIT | 8912 | 247 | 8634 | 2877 | 84.5 | 31 | ||||
CCSV | 8911 | 230 | 8652 | 2883 | 77.8 | 29 | ||||
TZSV | 8919 | 233 | 8658 | 2885 | 76.9 | 28 | ||||
MYSV | 8918 | 273 | 8613 | 2870 | 76.1 | 32 | ||||
IYSV serogroup | ||||||||||
HCRV | 8908 | 250 | 8622 | 2873 | 69.0 | 33 | ||||
PolRSV | 8893 | 230 | 8631 | 2876 | 68.8 | 32 | ||||
TYRV | 8877 | 223 | 8622 | 2873 | 68.5 | 32 | ||||
IYSV | 8880 | 225 | 8622 | 2873 | 67.8 | 33 | ||||
TSWV serogroup | ||||||||||
CSNV | 8955 | 397 | 8625 | 2874 | 45.2 | 33 | ||||
GRSV-US | 8876 | 217 | 8625 | 2874 | 45.2 | 34 | ||||
TCSV | 8868 | 215 | 8622 | 2873 | 44.8 | 31 | ||||
TSWV | 8897 | 236 | 8628 | 2875 | 43.1 | 33 | ||||
Other serotype | ||||||||||
INSV | 8780 | 147 | 8598 | 2865 | 44.9 | 35 | ||||
SVNaV | 9010 | 184 | 8796 | 2931 | 42.5 | 30 | ||||
BeNMV | 9040 | 220 | 8799 | 2932 | 42.3 | 21 | ||||
M RNA | Full length | 5'UTR | NSm | IGR | GPs | 3'UTR | ||||
nt | nt | nt | aa | Identity (%) | nt | nt | aa | Identity (%) | nt | |
WSMoV serogroup | ||||||||||
MVBaV | 4731 | 57 | 930 | 309 | — | 322 | 3375 | 1124 | — | 47 |
CaCV-AIT | 4823 | 56 | 927 | 308 | 82.6 | 427 | 3366 | 1121 | 80.9 | 47 |
CaCV-HT-1 | 4780 | 29 | 927 | 308 | 82.3 | 436 | 3369 | 1122 | 78.9 | 19 |
GBNV | 4801 | 56 | 924 | 307 | 81.9 | 408 | 3366 | 1121 | 84.3 | 47 |
WBNV | 4794 | 55 | 924 | 307 | 79.9 | 402 | 3366 | 1121 | 81.6 | 47 |
TZSV | 4945 | 54 | 930 | 309 | 77.3 | 546 | 3369 | 1122 | 73.2 | 46 |
WSMoV | 4877 | 55 | 939 | 312 | 75.2 | 470 | 3366 | 1121 | 80.7 | 47 |
CCSV | 4704 | 54 | 930 | 309 | 75.1 | 303 | 3372 | 1123 | 73.6 | 45 |
TNRV | 4716 | 59 | 933 | 310 | 73.1 | 307 | 3369 | 1122 | 65.3 | 48 |
MYSV | 4815 | 58 | 927 | 308 | 64.6 | 398 | 3384 | 1127 | 63.4 | 48 |
IYSV serogroup | ||||||||||
TYRV | 4786 | 62 | 927 | 308 | 68.5 | 354 | 3393 | 1130 | 62.9 | 50 |
IYSV | 4821 | 63 | 936 | 311 | 68.1 | 394 | 3411 | 1136 | 60.3 | 17 |
PolRSV | 4710 | 62 | 927 | 308 | 66.2 | 263 | 3408 | 1135 | 60.0 | 50 |
HCRV | 4741 | 47 | 927 | 308 | 65.9 | 330 | 3390 | 1129 | 61.9 | 47 |
TSWV serogroup | ||||||||||
GRSV-SA | — | — | 912 | 303 | 39.2 | — | 3402 | 1133 | 33.4 | — |
GRSV-US | 4848 | 99 | 912 | 303 | 38.6 | 348 | 3405 | 1334 | 34.1 | 84 |
CSNV | 4830 | 101 | 912 | 303 | 38.6 | 326 | 3408 | 1135 | 34.5 | 83 |
TCSV | — | — | 912 | 303 | 38.6 | — | 3405 | 1134 | 34.1 | — |
TSWV | 4767 | 100 | 909 | 302 | 37.5 | 266 | 3408 | 1135 | 34.1 | 84 |
ZLCV | — | — | 912 | 303 | 34.3 | — | 3408 | 1135 | 34.5 | — |
Other serotype | ||||||||||
BeNMV | 4886 | 64 | 954 | 317 | 37.6 | 299 | 3486 | 1161 | 33.1 | 83 |
INSV | 4962 | 85 | 912 | 303 | 36.9 | 465 | 3333 | 1110 | 32.9 | 86 |
SVNaV | 4955 | 57 | 951 | 316 | 34.1 | 267 | 3588 | 1195 | 30.1 | 92 |
S RNA | Full length | 5'UTR | NSs | IGR | N | 3'UTR | ||||
nt | nt | nt | aa | Identity (%) | nt | nt | aa | Identity (%) | nt | |
WSMoV serogroup | ||||||||||
MVBaV | 3294 | 65 | 1320 | 439 | 1008 | 834 | 277 | 67 | ||
CaCV-AIT | 3477 | 66 | 1320 | 439 | 71.3 | 1199 | 828 | 275 | 74.4 | 67 |
CaCV-HT-1 | — | — | 1320 | 439 | 69.5 | — | 834 | 277 | 72.9 | — |
TNeV | — | — | — | — | — | — | 828 | 275 | 74.0 | — |
WSMoV | 3558 | 67 | 1320 | 439 | 70.8 | 1278 | 828 | 275 | 70.0 | 65 |
GBNV | 3057 | 66 | 1320 | 439 | 70.6 | 773 | 831 | 276 | 71.5 | 67 |
WBNV | 3401 | 66 | 1320 | 439 | 70.4 | 1120 | 828 | 275 | 71.8 | 67 |
TNSV | 3012 | 66 | 1380 | 459 | 61.7 | 664 | 834 | 277 | 61.5 | 68 |
TZSV | 3279 | 64 | 1380 | 459 | 60.6 | 934 | 837 | 278 | 59.4 | 64 |
CCSV | 3172 | 66 | 1383 | 460 | 59.6 | 825 | 834 | 277 | 60.4 | 64 |
TNRV | 3023 | 65 | 1356 | 451 | 47.3 | 690 | 846 | 281 | 56.2 | 66 |
MYSV | 3232 | 68 | 1410 | 469 | 45.4 | 847 | 840 | 279 | 58.4 | 67 |
PhySMV | 3257 | 68 | 1410 | 469 | 45.0 | 872 | 840 | 279 | 58.4 | 67 |
IYSV serogroup | ||||||||||
IYSV | 3105 | 70 | 1332 | 443 | 49.4 | 811 | 822 | 273 | 44.8 | 70 |
TYRV | 3061 | 71 | 1332 | 443 | 49.4 | 762 | 825 | 274 | 44.1 | 71 |
HCRV | 2744 | 73 | 1338 | 445 | 48.1 | 437 | 825 | 274 | 42.7 | 71 |
PolRSV | 2485 | 73 | 1332 | 443 | 46.7 | 183 | 825 | 274 | 41.9 | 72 |
TSWV serogroup | ||||||||||
MeSMV | 3283 | 80 | 1368 | 455 | 20.2 | 887 | 789 | 262 | 28.5 | 159 |
TSWV | 2955 | 88 | 1404 | 467 | 17.7 | 535 | 777 | 258 | 29.9 | 151 |
GRSV-SA | — | — | 1404 | 467 | 17.5 | — | — | 235 | 28.5 | — |
GRSV-US | 3049 | 87 | 1404 | 467 | 17.7 | 630 | 777 | 258 | 29.2 | 151 |
CSNV | 2947 | 79 | 1404 | 467 | 17.3 | 529 | 783 | 260 | 27.0 | 152 |
PNSV | 2949 | 87 | 1404 | 467 | 17.0 | 529 | 777 | 258 | 28.5 | 153 |
ZLCV | — | — | — | — | — | — | 783 | 260 | 28.5 | — |
TCSV | — | — | — | — | — | — | 777 | 258 | 28.1 | — |
ANSV | — | — | — | — | — | — | 777 | 258 | 28.1 | — |
GYSV serotype | ||||||||||
GCFSV | 2833 | 67 | 1419 | 472 | 16.3 | 455 | 813 | 270 | 20.8 | 79 |
GYSV | 2970 | 57 | 1443 | 480 | 15.9 | 653 | 741 | 246 | 22.9 | 76 |
Other serotype | ||||||||||
INSV | 2992 | 62 | 1350 | 449 | 19.9 | 642 | 789 | 262 | 24.3 | 149 |
BeNMV | 2584 | 60 | 1320 | 439 | 19.1 | 315 | 813 | 270 | 27.3 | 76 |
SVNaV | 2603 | 58 | 1323 | 440 | 18.8 | 318 | 834 | 277 | 29.8 | 70 |
LNRV | 2768 | 85 | 1326 | 441 | 17.7 | 385 | 807 | 268 | 19.9 | 159 |