Table 2.
RegulomeDB category | Category description | Number of SNPs with RegulomeDB score 1a–1f | |
---|---|---|---|
In the whole human genome | In the region 9q21 | ||
1a | eQTL + TF binding + matched TF motif + matched DNase footprint + DNase peak | 352 | 1 |
1b | eQTL + TF binding + any motif + DNase footprint + DNase peak | 2568 | 17 |
1c | eQTL + TF binding + matched TF motif + DNase peak | 85 | 0 |
1d | eQTL + TF binding + any motif + DNase peak | 1668 | 7 |
1e | eQTL + TF binding + matched TF motif | 54 | 0 |
1f | eQTL + TF binding/DNase peak | 34706 | 127 |