Skip to main content
. 2015 Aug 4;112(33):E4571–E4580. doi: 10.1073/pnas.1507709112

Table 1.

Mutagenic consequences of traversing 5ClC with several different DNA polymerases

Family Polymerase Domain Species Proofreading % C→T induced by 5ClC
A Pol I (Klenow fragment Exo+) Bacteria E. coli Yes 4.4 ± 0.3
A Pol I (Klenow fragment Exo) Bacteria E. coli No 4.4 ± 0.3
A T4 DNA polymerase Viruses T4 phage Yes 4.1 ± 0.2
A Pol γ (gamma) Eukaryota H. sapiens Yes 3.5 ± 0.3
B Pol ζ (zeta) Eukaryota S. cerevisiae No 3.4 ± 0.2
C Pol III holoenzyme (in vivo)* Bacteria E. coli Yes 4.6 ± 0.6
D PfuTurbo Archaea P. furiosus Yes 5.8 ± 0.7
X Pol β (beta) Eukaryota H. sapiens No 9.1 ± 0.6
Y Pol η (eta) Eukaryota H. sapiens No 3.7 ± 0.7
RT HIV RT Viruses HIV No 4.9 ± 1.2

A panel of DNA polymerases spanning all known polymerase families (A, B, C, D, X, Y, RT) and all life domains was used to extend a primer annealed to an M13 ssDNA genome containing one 5ClC lesion. Subsequently, the newly synthesized strand was specifically PCR amplified (Fig. 3C), and the PCR product was analyzed with the REAP assay to determine the amount of C→T transitions induced by 5ClC.

*

The result from Fig. 2C.

The average of the two results from Fig. 3B.