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. 2015 Aug 3;112(33):E4581–E4590. doi: 10.1073/pnas.1510031112

Table S1.

Primers used in this study

Primer name Enzyme Sequence Resulting plasmids and descriptions
RabGDIα_F BamHI 5′-GGATCCACCATGGATGAGGAATACGATGTGATTG-3′ pRabGDIα_Flag
RabGDIα_R XhoI 5′-GCGGCCGCTCACTCGAGCTGATCAGCTTCTCCAAAGACATCA-3′ pRabGDIα_Flag
RabGDIα_M132I_F 5′-AAGATCTACAAAGTGCCATCCACCGAGACTGAGGCCTTGGCTTCTAATCTGATCGGCATG-3′ pRabGDIα_Μ132Ι_Flag
RabGDIα_M132I_R 5′-CGGTGGATGGCACTTTGTAGATCTTG-3′ pRabGDIα_Μ132Ι_Flag
RabGDIα_Y39V_R 5′-AAGAGCTCTCACCCCCAACGTAGGGGTTT-3′ pRabGDIα_Y39V_Flag
RabGDIα_R218A/Y219A_F 5′-AGCGAGTCCCTGGCCGCGGCTGGCAAGAGCCCCTAT-3′ pRabGDIα_R218A/Y219A_Flag
RabGDIα_R218A/Y219A_R 5′-ATAGGGGCTCTTGCCAGCCGCGGCCAGGGACTCGCT-3′ pRabGDIα_R218A/Y219A_Flag
RabGDIα_E233S/R240A_F 5′-GGCCTGGGTTCGCTGCCCCAGGGCTTTGCCGCATTGAGTGCC-3′ pRabGDIα_E233S/R240A_Flag
RabGDIα_E233S/R240A_R 5′-GGCACTCAATGCGGCAAAGCCCTGGGGCAGCGAACCCAGGCC-3′ pRabGDIα_E233S/R240A_Flag
RabGDIβ_F BamHI 5′-GGATCCACCATGAATGAGGAATACGACGTGATCGTGCTGGGC-3′ pRabGDIβ_Flag
RabGDIβ_R XhoI 5′-GCGGCCGCTTACTCGAGGTCTTCTCCATAAATGTCATTCTTCTTGCGC-3′ pRabGDIβ_Flag
Gbp1_F BamHI 5′-GGATCCACCATGGCCTCAGAAATCCACATGAAAG-3′ pHA_Gbp1
Gbp1_R NotI 5′-GCGGCCGCTTAAAGTATGGTGCATGATCGAGGTGG-3′ pHA_Gbp1
Gbp2_F BglII 5′-AGATCTACCATGGCCTCAGAGATCCACATGTCG-3′ pHA_Gbp2
Gbp2_R NotI 5′-GCGGCCGCTCAGAGTATAGTGCACTTCCCAGACG-3′ pHA_Gbp2
Gbp2_C586S_R NotI 5′-GCGGCCGCTCAGAGTATAGTGCTCTTCCCAGACG-3′ pHA_Gbp2_C586S
Gbp2_K51A_R 5′-CAGCTAGCTTGTTCATCAGGTAGGATGCGCCTGTGCGGTAGAGGCCCACG-3′ pHA_Gbp2_K51A
Gbp3_F BamHI 5′-GGATCCACCATGGAGGCACCCATTTGTCTGGTGGAA-3′ pHA_Gbp3
Gbp3_R NotI 5′-GCGGCCGCCTAACTACTTAGTGAGCCGAGG-3′ pHA_Gbp3
Gbp5_F1 EcoRI 5′-GAATTCACCATGGCCCCAGAGATTCACATGCC-3′ pHA_Gbp5
Gbp5_R1 5′-CATCTGATGTGATGGCATGCCCATTGG-3′ pHA_Gbp5
Gbp5_F2 5′-CCAATGGGCATGCCATCACATCAGATG-3′ pHA_Gbp5
Gbp5_R2 NotI 5′-GCGGCCGCTTAGCTTATAACACAGTCATGATG-3′ pHA_Gbp5
Gbp7_F BamHI 5′-GGATCCACCATGGCATCTGGTCCCAACATGGAG-3′ pHA_Gbp7
Gbp7_R NotI 5′-GCGGCCGCTTAGAGTTTTCTAACTTTGTCTGAA-3′ pHA_Gbp7
Rab10_F EcoRI 5′-GAATTCATGGCGAAGAAGACGTACGACCTG-3′ pHA_Rab10
Rab10_R NotI 5′-GCGGCCGCTCAGCAGCACTTGCTCTTCCAGCC -3′ pHA_Rab10
RabGDIαKO_SA_F SacII 5′-CCGCGGCTTCGTGTCACTCATTTCTGCACTG-3′ pKO-RabGDIα
RabGDIαKO_SA_R SalI 5′-GTCGACGTACTAGAGTGCAGGAACACAGGAC-3′ pKO-RabGDIα
RabGDIαKO_MA_F XhoI 5′-CTCGAGTCCTGTGTTCCTGCACTCTAGTAC-3′ pKO-RabGDIα
RabGDIαKO_MA_R BamHI 5′-GGATCCGTAAGGGTCCTCTAGGACTACACAG-3′ pKO-RabGDIα
RabGDIαKO_LA_F MluI 5′-ACGCGTCTGTGTAGTCCTAGAGGACCCTTAC-3′ pKO-RabGDIα
RabGDIαKO_LA_R NotI 5′-GCGGCCGCGATATGCAAGTTGTGCACACCCACC-3′ pKO-RabGDIα
RabGDIα_screening_F 5′-ATGCAGAGTCCGGTATCCGATCCAT-3′ PCR screening
RabGDIα_WT_R 5′-CACCTCGGTGATAGAGATAGGGAAG-3′ PCR screening
RabGDIα_KO_R 5′-TACGTGCCAGCCATCTTAGAGATACAG-3′ PCR screening
RabGDIβ_WT_F 5′-GATGCCATTGCTGATACCTGGACTG-3′ PCR screening
RabGDIβ_WT_R 5′-GAGTGAAATACCACTCTGATGGCTGG-3′ PCR screening
RabGDIβ_KO_F 5′-CTGTCGCTGTCTTCAAATGCACCAG-3′ PCR screening
RabGDIβ_KO_R 5′-GCCTGGCGCACTATTCAATACCATC-3′ PCR screening
RabGDIα_qpF 5′-GCTGATCTGTGATCCCAGTTACATCCC-3′ Quantitative RT-PCR
RabGDIα_qpR 5′-TTCTGCAGTCTCTACAGTGGTGCTGG-3′ Quantitative RT-PCR
Gdi2_gRNA1_F 5′-TTTCTTGGCTTTATATATCTTGTGGAAAGGACGAAACACCgcttttctaagcattcacta-3′ Gdi2_gRNA1
Gdi2_gRNA1_R 5′-GACTAGCCTTATTTTAACTTGCTATTTCTAGCTCTAAAACtagtgaatgcttagaaaagc-3′ Gdi2_gRNA1
Gdi2_gRNA2_F 5′-TTTCTTGGCTTTATATATCTTGTGGAAAGGACGAAACACCgtttgacataaacacgcccc-3′ Gdi2_gRNA2
Gdi2_gRNA2_R 5′-GACTAGCCTTATTTTAACTTGCTATTTCTAGCTCTAAAACggggcgtgtttatgtcaaac-3′ Gdi2_gRNA2
Gbp2_gRNA1_F 5′-TTTCTTGGCTTTATATATCTTGTGGAAAGGACGAAACACCgtcatcacctgaccagagtg-3′ Gbp2_gRNA1
Gbp2_gRNA1_R 5′-GACTAGCCTTATTTTAACTTGCTATTTCTAGCTCTAAAACcactctggtcaggtgatgac-3′ Gbp2_gRNA1
Gdi2_T7gRNA1_F 5′-TTAATACGACTCACTATAGGgcttttctaagcattcactaGTTT-3′ Gdi2_gRNA1
Gdi2_T7gRNA2_F 5′-TTAATACGACTCACTATAGGgtttgacataaacacgccccGTTT -3′ Gdi2_gRNA2
Gbp2_T7gRNA2_F 5′-TTAATACGACTCACTATAGGgtcatcacctgaccagagtgGTTT-3′ Gbp2_gRNA1
gRNA_common_R 5′-AAAAGCACCGACTCGGTGCCACTTTT-3′ Gdi2_gRNA1, Gdi2_gRNA2, Gbp2_gRNA1
T7Cas9_IVT_F 5′-taatacgactcactatagggagaATGGACAAGAAGTACTCCATT-3′ Cas9 mRNA
Cas9_R 5′-ggatccGCTATGGCAGGGCCTGCCGCCCCGA -3′ Cas9 mRNA
Gbp2_indel_F 5′-catagggatggcaccacatgttgtg-3′ Screening the mutation of the Gbp2 locus
Gbp2_indel_R 5′-aggagtccaagtgattctgctaagc-3′ Screening the mutation of the Gbp2 locus

—, no restriction enzyme sites in primers.