Skip to main content
. 2015 Aug 25;10(8):e0136228. doi: 10.1371/journal.pone.0136228

Table 3. Genes in the putative lomofungin biosynthesis cluster.

ORFs aa Proposed function Identity (%) Ortholog identified by BLAST search
lomo1 201 Shikimate kinase 88% Streptomyces fulvoviolaceus
lomo2 378 Chorismate synthase 97% Streptomyces fulvoviolaceus
lomo3 272 3-phosphoshikimate- 1-carboxyvinyltransferase 78% Streptomyces sp. NRRL B-5680
lomo4 306 5,10-methylenetetrahydrofolate reductase 90% Streptomyces sp. NRRL S-646
lomo5 203 Hexokinase 71% Streptomyces albaduncus
lomo6 398 S-adenosylmethionine synthetase 90% Streptomyces sp. NRRL S-646
lomo7 201 Quinone oxidoreductase 78% Streptomyces anulatus
lomo8 162 Flavin reductase 85% Streptomyces sp. NRRL S-646
lphzG 213 phzG 53% Pseudomonas chlororaphis GP72
lphzF 278 phzF 66% Pseudomonas chlororaphis GP72
lphzE 598 phzE 63% Pseudomonas chlororaphis GP72
lphzD 111 phzD 65% Pseudomonas chlororaphis GP72
lphzC 368 phzC 60% Pseudomonas chlororaphis GP72
lphzB 160 phzB 72% Pseudomonas chlororaphis GP72
lomo9 354 Acyl-CoA dehydrogenase 95% Streptomyces sp. NRRL S-646
lomo10 442 Flavin-dependent monooxygenase 48% Streptomyces viridosporus
lomo11 273 Methyltransferase 39% Streptomyces auratus
lomo12 342 Transcriptional regulator 94% Streptomyces sp. NRRL S-646
lomo13 484 Transporter 91% Streptomyces sp. NRRL S-646
lomo14 314 Alcohol dehydrogenase 89% Streptomyces sp. NRRL S-646
lomo15 340 EsmB1, phenazine antibiotic biosynthesis protein 72% Streptomyces antibioticus
lomo16 435 Aldehyde dehydrogenase 86% Streptomyces sp. NRRL S-646
lomo17 337 Transcriptional regulator 86% Streptomyces sp. NRRL S-646