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. 2015 Aug 27;8:129. doi: 10.1186/s13068-015-0320-1

Table 2.

Strains, plasmids, and primers used in this study

Bacterial strain, plasmid or primer Relevant characteristic or sequence Source or restriction
Strains
 B. subtilis ACR B. subtilis 168 with pMA5-HpaII-acr, source of yodC and ldhA genes Lab stock
 B. subtilis AY B. subtilis ACR blocked in YodC by insertion of a Cat expression cassette This study
 B. subtilis AFY B. subtilis ACR blocked in YodC by insertion of fdh gene This study
 B. subtilis AFYL B. subtilis AFY blocked in LdhA by insertion of a CAT expression cassette This study
 E. coli JM109 recA1, endA1, gyrA96, thi-1, hsd R17(rk- mk +)supE44 Invitrogen
 Candida boidinii Source of fdh gene Lab stock
Plasmids
 pMD18-T Cloning vector Takara
 pBGSC6 Containing Cat expression cassette Lab stock
 pMA5-HpaII Expression vector (in E. coli, Apr; in B. subtilis, Kanr) Lab stock
 T-cat pMD18-T with Cat expression cassette This study
 T-yodC pMD18-T with yodC This study
 T-yodC::cat cat inserted into the EcoR V site of T-yodC This study
 T-fdh pMD18-T with fdh This study
pMA5-fdh pMA5-HpaII with fdh
 T-HpaII-fdh pMD18-T with HpaII-fdh This study
 T-yodC::fdh fdh inserted into the Eco47 III site of T-yodC This study
 T-ldhA pMD18-T with ldhA This study
 T-ldhA::cat cat inserted into the EcoR V site of T-ldhA This study
Primers 5′-3′
 P1 ACCGGGATCCATGACGAATACTCTGGAT BamH I
 P2 ACCGACGCGTTTACAGCCAAGTTGATAC Mlu I
 P3 CGCGATATCAAAAAAGGATTGATTCTAATG EcoR V
 P4 CGCGATATCTAGTGACATTAGAAAACCGAC EcoR V
 P5 CGCCATATGATGAAGATCGTTTTAGTC Nde I
 P6 CGCACGCGTTTATTTCTTATCGTGTTTAC Mlu I
 P7 ACCGAGCGCTATTTTTTGAGTGATCTTCTC Eco47 III
 P8 ACCGAGCGCTTTATTTCTTATCGTGTTTAC Eco47 III
 P9 ACCGGGATCCATGATGAACAAACATG BamH I
 P10 ACCGACGCGTTTAGTTGACTTTTTGTTCTG Mlu I

Underlined nucleotides are the restriction enzyme sites