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. 2015 Jun 19;81(14):4581–4590. doi: 10.1128/AEM.00778-15

TABLE 4.

Detection of Chlamydiaceae in northern gannet samples using qPCR

ompA sequence group and DNA sample identificationa Cq
23S-qPCR Chlamydiaceae incA-qPCR C. psittaci ompA-qPCR C. psittaci
Group 1
    12-1761_J075 23.6 25.3 32.1
    12-3998_AN085 26.6 28.4 36.5
    12-3998_AO014 23.5 25.3 34.4
    12-3998_AO024* 19.6 21.2 29.9
    12-3998_AO054 23.2 24.9 33.4
    13-2791_BC038 20.3 21.8 30.3
    13-2791_BC061 28.5 29.3 39.4
    13-2791_BC064† 34.0 35.1 Negb
    14-1437_C075† 37.3 39.0 Neg
    14-1437_C098† 36.4 38.0 Neg
Group 2
    12-1761_J084 31.8 32.7 29.5
    12-3998_AO022 24.6 26.4 25.2
    12-3998_AO029 25.4 26.9 25.7
    12-3998_AO074 30.0 31.9 30.3
    12-3998_AO075* 23.7 25.7 24.4
    13-2791_BC036 27.9 28.8 29.5
    13-2791_BC063† 35.1 35.2 36.3
    13-2791_BC065 26.2 26.9 27.4
    13-2791_BC073‡ 25.0 26.2 26.5
a

*, arbitrarily designed type sample for each group; †, no ompA amplification for sequencing; ‡, for this bird a second swab was taken and identified as 13-2791_BC076.

b

Neg, negative.