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. Author manuscript; available in PMC: 2016 Jan 31.
Published in final edited form as: Tissue Antigens. 2015 Feb;85(2):117–126. doi: 10.1111/tan.12507

TABLE 5.

Comparison of HLA-DQB1 allele frequencies between RV144 individuals and other populationsa

Allele G Groupingb RV144 Northeast Thais (7) Southern China (Han) (16) Taiwan (17) Mongolia (Khalkha) (18) Vietnam (19) Japan (20) South Korea (21) India (Delhi) (22) EUR (23) AFA (23) API (23) HIS (23)
2N=900 2N=800 2N=528 2N=366 2N=200 2N=340 2N=742 2N=970 2N=224 2N=12792 2N=1208 2N=1172 2N=1074
DQB1*02:01 & 02:07c DQB1*02:01:01G & 02:07 0.140 0.109 0.121 0.126 0.175 0.091 0.003 0.094 0.255 0.230 0.223 0.109 0.185
DQB1*03:01 DQB1*03:01:01G 0.187 0.141 0.242 0.238 0.255 0.400 0.113 0.135 0.134 0.185 0.174 0.194 0.200
DQB1*03:02 DQB1*03:02:01G 0.036 0.025 0.070 0.036 0.040 0.024 0.108 0.103 0.046 0.095 0.037 0.076 0.189
DQB1*03:03 DQB1*03:03:02G 0.120 0.085 0.150 0.164 0.135 0.126 0.135 0.114 0.032 0.045 0.016 0.122 0.021
DQB1*04:01 DQB1*04:01:01G 0.037 0.045 0.040 0.060 0.050 0.035 0.115 0.088 0.005 0.045
DQB1*04:02 DQB1*04:02:01G 0.011 0.010 0.008 0.003 0.045 0.006 0.039 0.037 0.005 0.025 0.068 0.023 0.091
DQB1*05:01 DQB1*05:01:01G 0.136 0.163 0.034 0.038 0.075 0.118 0.075 0.093 0.074 0.123 0.154 0.074 0.110
DQB1*05:02 DQB1*05:02:01G 0.173 0.203 0.110 0.082 0.035 0.065 0.035 0.022 0.041 0.013 0.027 0.074 0.016
DQB1*05:03 DQB1*05:03:01G 0.056 0.038 0.030 0.030 0.010 0.035 0.027 0.051 0.134 0.025 0.015 0.062 0.013
DQB1*06:01 DQB1*06:01:01G 0.079 0.075 0.112 0.153 0.055 0.065 0.183 0.096 0.094 0.008 0.001 0.119 0.014
DQB1*06:02 DQB1*06:02:01G 0.011 0.010 0.038 0.030 0.050 0.012 0.082 0.071 0.009 0.143 0.198 0.044 0.081
DQB1*06:03 DQB1*06:03:01G 0.003 0.004 0.009 0.003 0.035 0.006 0.007 0.009 0.060 0.065 0.023 0.023 0.041
DQB1*06:04 DQB1*06:04:01G 0.004 0.011d 0.008 0.003 0.025 0.003 0.073 0.051 0.018 0.032 0.020 0.014 0.028
DQB1*06:09 DQB1*06:09:01G 0.006 0.019 0.033 0.015 0.004 0.037 0.008 0.035 0.019 0.006

AFA, African American; API, Asian American; EUR, European American; HIS, Hispanic American.

a

Bold values: Significant at a p-value threshold of 0.05.

b

Nomenclature used for alleles that were ambiguous for exon 2 by four-digit HLA typing.

c

Combined frequency of all DQB1*02 subtypes.

d

Reported as DQB1*06(04-06).