Table 2.
Effector gene contents of Pseudomonas syringae pv. syringae strains B728a, B301D and HS191
SI. no. | Organisms | Effectors genes | B728a locus_tag | B301D locus_tag | HS191 locus_tag |
---|---|---|---|---|---|
1 | P. syringae pv. syringae B728a | avrB3 | Psyr_1219 | – | – |
2 | avrE1 | Psyr_1188 | PsyrB_06260 | PsyrH_20365 | |
3 | avrPto1 | Psyr_4919 | – | – | |
4 | avrRpm1 | Psyr_0738 | – | – | |
5 | hopAA1 | Psyr_1183 | PsyrB_06235 | PsyrH_20390 | |
6 | hopAB1 | Psyr_4659 | – | – | |
7 | hopAC1 | Psyr_0527 | PsyrB_02970 | PsyrH_02665 | |
8 | hopAE1 | Psyr_4269 | PsyrB_22195 | PsyrH_04865 | |
9 | hopAF1 | Psyr_3813 | – | PsyrH_07325 | |
10 | hopAG1 | Psyr_0778 | PsyrB_04160 | PsyrH_22420 | |
11 | hopAH1 | Psyr_0779 | PsyrB_04165 | PsyrH_22410 | |
12 | hopAH2 | Psyr_3123 | PsyrB_16095 | PsyrH_10955 | |
13 | hopAI1 | Psyr_0785 | PsyrB_04195 | PsyrH_22380 | |
14 | hopAJ2 | Psyr_4357 | PsyrB_22625 | PsyrH_04450 | |
15 | hopAK1 | Psyr_3839 | PsyrB_19950 | PsyrH_07200 | |
16 | hopAN1 | Psyr_0465 | PsyrB_02660 | PsyrH_02345 | |
17 | hopAP1 | Psyr_1890 | PsyrB_09325 | – | |
18 | hopH1 | Psyr_1889 | PsyrB_09320 | PsyrH_20075 | |
19 | hopI1 | Psyr_4326 | PsyrB_22470 | PsyrH_04610 | |
20 | hopJ1 | Psyr_1017 | PsyrB_05375 | PsyrH_21240 | |
21 | hopL1 | Psyr_2631 | – | – | |
22 | hopM1 | Psyr_1186 | PsyrB_06250 | PsyrH_20375 | |
23 | hopX1 | Psyr_1220 | – | – | |
24 | hopZ3 | Psyr_1224 | – | – | |
25 | P. syringae pv. syringae B301D | hopA2 | – | PsyrB_06425 | PsyrH_20205 |
26 | P. syringae pv. maculicola ES4326 | hopAL1 | – | PsyrB_08740 | – |
27 | P. syringae Cit 7 | hopAX1 | – | – | PsyrH_18845 |
28 | P. syringae pv. syringae B64 | hopAZ1 | – | – | PsyrH_17410 |
29 | P. syringae pv. syringae B64 | hopBA1 | – | – | PsyrH_12900 |
30 | P. syringae pv. aptata DSM 50252 | hopBC1 | – | PsyrB_08275 | PsyrH_18105 |
31 | P. syringae pv. tomato DC3000 | hopC1 | – | – | PsyrH_20070 |
32 | P. syringae pv. tomato T1 | hopR1 | – | – | PsyrH_12260 |
33 | P. syringae pv. maculicola ES4326 | hopW1 | – | – | PsyrH_12235 |
34 | P. syringae pv. syringae B64 | hopZ1 | – | – | PsyrH_20105 |
Total effectors | 24/34 | 19/34 | 25/34 |
– indicates absence.