Table 3.
GC% analyses of the Paracoccus denitrificans bio operon and exploration of their possible origins
| GC% | Origins matched1 | |||
|---|---|---|---|---|
| Ch-I | Ch-II | Plasmid | ||
| Ch-I | 66.7 | – | – | – |
| Ch-II | – | 66.8 | – | – |
| Plasmid | – | – | 67.1 | – |
| birA | – | 72.6 | – | Paracoccus aminophilus (76%) |
| bioR1 | 66.36 | – | – | Celeribacter indicus (84%) |
| bioR2 | – | 72.52 | – | Azorhizobium caulinodans (78%) |
| bioB1 | – | 66.77 | – | Rhodobacter capsulatus (81%) |
| bioB2 | 68.22 | – | – | Rhodobacter sphaeroides (90%) |
| bioY1 | 71.86 | – | – | Paracoccus denitrificans (100%) |
| bioY2 | – | – | 68.92 | P. denitrificans PD1222 plasmid 1 (100%) |
| bioM | – | – | 66.54 | P. denitrificans plasmid 1 (100%) |
| bioN | – | – | 70.23 | P. denitrificans plasmid 1 (100%) |
| bioF | – | 74.37 | – | P. denitrificans (100%) |
| bioD | – | 74.06 | – | P. aminophilus (70.9%) |
| bioA | – | 71.18 | – | R. capsulatus (76%) |
| bioG | – | 54.64 | – | Xylella fastidiosa (100%) |
| bioC | – | 75.13 | – | P. denitrificans (100%) |
–, not applicable; Ch, chromosome.
1
The nucleotide identity of the interested gene from P. denitrificans relative to its possible origins. The numbers in grey background denote the GC percentage of P. denitrificans Chromosome/plasmid.