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. 2015 Oct;28(10):1433–1441. doi: 10.5713/ajas.15.0091

Table 3.

Effects of nitrate on common classified bacteria genera in ruminal fluid ranked by average relative abundance (% of total sequences) using NGS technology

Phyla Taxon Treatments SEM p-value Contrast



Genus 0NR 1NR 2NR PL PQ
Bacteroidetes Prevotella 15.56 17.04 15.80 2.09 0.87 0.94 0.62
Bacteroidetes BF311 2.60 4.74 2.86 0.53 0.06 0.74 0.02
Bacteroidetes CF231 2.17 2.61 2.24 0.12 0.08 0.71 0.03
Bacteroidetes YRC22 1.77a 0.70b 0.89b 0.23 0.03 0.03 0.07
Bacteroidetes Paludibacter 0.16 0.11 0.06 0.04 0.34 0.16 0.88
Fibrobacteres Fibrobacter 0.71 1.06 0.83 0.20 0.49 0.70 0.27
Firmicutes Ruminococcus 2.28 1.44 1.18 0.37 0.17 0.08 0.54
Firmicutes Succiniclasticum 1.41 1.10 1.59 0.23 0.38 0.60 0.21
Firmicutes Clostridium 1.03 1.10 1.26 0.15 0.57 0.32 0.82
Firmicutes Butyrivibrio 0.75 0.93 0.80 0.05 0.13 0.56 0.06
Firmicutes Coprococcus 0.41 0.36 0.54 0.08 0.36 0.32 0.30
Firmicutes RFN20 0.28 0.42 0.42 0.07 0.32 0.21 0.41
Firmicutes Oscillospira 0.31 0.31 0.45 0.07 0.37 0.23 0.47
Proteobacteria Campylobacter 0.04b 0.48b 3.49a 0.43 <0.01 <0.01 0.05
Proteobacteria Ruminobacter 0.53ab 0.95a 0.15b 0.15 0.03 0.12 0.02
Proteobacteria Succinivibrio 0.28 0.64 0.18 0.14 0.13 0.63 0.06
Proteobacteria Acinetobacter 0.16 0.07 0.30 0.08 0.18 0.25 0.13
Proteobacteria Lampropedia 0.04 0.04 0.32 0.11 0.18 0.11 0.32
Proteobacteria Desulfovibrio 0.10 0.12 0.15 0.03 0.45 0.23 0.93
Proteobacteria Pseudomonas 0.12 0.11 0.08 0.04 0.79 0.52 0.90
Spirochaetes Sphaerochaeta 0.15b 0.40a 0.08b 0.05 0.01 0.36 <0.01
Spirochaetes Treponema 0.14 0.15 0.23 0.04 0.32 0.17 0.55

NGS, next-generation DNA sequencing; 0NR, control; 1NR, 1% nitrate; 2NR, 2% nitrate; SEM, standard error of the mean.

1

PL is liner tendency; PQ is quadratic tendency.

Different superscripts in the same row represent significant differences (p<0.05).