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. Author manuscript; available in PMC: 2016 Sep 1.
Published in final edited form as: J Acquir Immune Defic Syndr. 2015 Sep 1;70(1):42–53. doi: 10.1097/QAI.0000000000000671

Table 2.

Major IAS Resistance Mutations Accumulated on first-line ART

PI-
low
PI-
higher
NNRTI-
low
NNRTI-
higher
Poisson
P-value*
Total children 67 64 67 65

Number requiring tests** 34 22 26 25
Number with test results 28 17 20 22

Included in analysis* 61 59 61 62

NRTI resistance
1 or 2 mutations 11 (18%) 7 (12%) 12 (20%) 12 (19%) any difference
<0.001
≥3 mutations 0 (0%) 1 (2%) 0 (0%) 7 (11%)

PI or NNRTI resistance
1 or 2 mutations 10 (16 %) 4 (7%) 13 (21%) 12 (19%) PI versus
≥3 mutations 0 (0%) 0 (0%) 1 (2%) 5 (8%) NNRTI
<0.001

ABC+3TC 3TC+
ZDV/d4T
Other
(mainly ZDV+ddI)
Poisson
P-value*

Total children 62 166 35

Number requiring tests 15 67 25
Number with test results 9 59 19

Included in analysis* 56 158 29

NRTI resistance
1 or 2 mutations 4 (7%) 32 (20%) 6 (21%) any difference
<0.01
≥3 mutations 1 (2%) 7 (4%) 0 (0%)

Thymidine analogue mutations (TAMs)
1 or 2 TAMs 0 (0%) 6 (4%) 6 (21%)
≥3 TAMs 0 (0%) 4 (3%) 0 (0%)

K65R 1 (2%) 0 (0%) 0 (0%)
L74R 1 (2%) 1 (1%) 0 (0%)
Y115F 1 (2%) 0 (0%) 0 (0%)
M184V/I 5 (9%) 39 (25%) 0 (0%)
*

Analysis assumes those not requiring tests were not resistant, and excludes those with unavailable resistance results.

**

Resistance tests were required on first-line, while children were on ART, at 1) the last sample with RNA ≥1000c/ml before switch, 2) the last sample after confirmed RNA ≥1000c/ml (e.g. if not switched because ‘30000 criteria' not met and RNA re-suppressed to <1000c/ml), and 3) samples with RNA ≥1000c/ml at 4 years or trial end. IAS major resistance mutations were accumulated across multiple tests per child on first-line, where appropriate. The table displays number of children requiring tests and the number of children with test results, rather than the absolute number of tests performed.

Children are displayed in 4 groups defined by the class of ART initiated as first-line (PI-based versus NNRTI-based) and their randomized switch threshold (low=1000c/ml, higher=30000c/ml). IAS = International AIDS Society-USA, ART = antiretroviral therapy, PI = protease inhibitor, NNRTI = non-nucleoside reverse transcriptase inhibitor, NRTI = nucleoside reverse transcriptase inhibitor, ABC = abacavir, 3TC = lamivudine, ZDV = zidovudine, d4T = stavudine, ddI = didanosine