. Author manuscript; available in PMC: 2015 Sep 2.

Published in final edited form as: J Vet Intern Med. 2012 Nov 27;27(1):177–185. doi: 10.1111/jvim.12015

Table 5.

Variants found in sequencing TTPA.

Region	Polymorphism	Position within Gene	Type of Mutation	Individuals with 1 Minor Allele
5′UTR	UCD_Accession.21665078C>G^b	179 bp 5′ of exon 1	SNP: non-coding	1 affected
				2 controls
5′UTR	UCD_Accession.21665177G>T^b	80 bp 5′ of exon 1	SNP: non-coding	1 control
5′UTR	UCD_Accession.21665247A>C^b	10 bp of 5′ exon 1	SNP: non-coding	1 control
Exon 1	UCD_Accession.21665278C>G^b	Exon 1+21	SNP: synonymous	1 control
Exon 1	UCD_Accession.21662663C>G^b g.21665331C>G^a	Exon1+106	SNP: synonymous	1 control
Exon 1	UCD_Accession.21665441C>T^b g.21665398C>T^a	Exon 1+171	SNP: synonymous	1 affected
Exon 1	UCD_Accession.21665466A>G^b g.21665423T>A,G^a	Exon1+196	SNP: synonymous	2 controls
Intron 3	g.21677206A>G^a	Intron3+186	SNP: non-coding	1 affected
Intron 3	g.21677352A>G^a	Intron3+331	SNP: non-coding	1 affected
Intron 3	g.21678485C>T^a	Intron 3: 288 bp 5′ to exon 4	SNP: non-coding	1 affected
3′UTR	g.21682198T>C^a	3′UTR+378	SNP: non-coding	1 affected
3′UTR	g.21682218C>T^a	3′UTR+398	SNP: non-coding	1 affected

Equine genome reference sequence considered wild type.

Reference sequence not available for this region: wild type based on major allele. Genomic location was determined as the position 5′ to Exon 1.