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. 2015 Jul 23;16:52. doi: 10.1186/s12881-015-0194-x

Table 2.

Linkage disequilibrium between TERT single nucleotide polymorphisms

LD TERT SNP
r2, White rs2736122 rs4246742 rs6863494* rs4975605 rs2736100 rs2853668
rs2736122 x 0.053 --- 0.062 0.058 0.021
rs4246742 0.053 x --- 0.09 0.005 0.006
rs6863494 x
rs4975605 0.062 0.09 --- x 0.04 0.034
rs2736100 0.058 0.005 --- 0.04 x 0.13
rs2853668 0.021 0.006 --- 0.034 0.13 x
r2, African-American rs2736122 rs4246742 rs6863494 rs4975605 rs2736100 rs2853668
rs2736122 x 0.001 0.011 0.052 0.001 0.016
rs4246742 0.001 x 0.097 0.047 0.015 0.001
rs6863494 0.011 0.097 x 0.032 0.024 0.004
rs4975605 0.052 0.047 0.032 x 0.021 0.011
rs2736100 0.001 0.015 0.024 0.021 x 0.023
rs2853668 0.016 0.001 0.004 0.011 0.023 x

LD, linkage disequilibrium; SNP, single nucleotide polymorphism; *rs6863494 is monomorphic in whites