Table 3.
Summary of SNP markers and InDel markers integrated into the sequence-defined genetic linkage map through sequence comparison on scaffolds in Lupinus angustifolius a
Linkage groups | Genetic length (cM) | Number of anchored scaffoldsb | Number of SNP markers detected | Number of InDel markers detected |
---|---|---|---|---|
SLG-1 | 234.3 | 763 | 35,605 | 5,036 |
SLG-2 | 156.7 | 724 | 24,158 | 5,190 |
SLG-3 | 149 | 236 | 8,071 | 2,027 |
SLG-4 | 144.2 | 400 | 14,160 | 3,202 |
SLG-5 | 101.9 | 365 | 13,028 | 2,654 |
SLG-6 | 89 | 129 | 4,830 | 1,437 |
SLG-7 | 86.5 | 114 | 6,959 | 1,512 |
SLG-8 | 85 | 289 | 13,761 | 1,688 |
SLG-9 | 83.5 | 155 | 8,772 | 1,578 |
SLG-10 | 82.6 | 138 | 6,230 | 1,132 |
SLG-11 | 82.2 | 344 | 13,869 | 2,164 |
SLG-12 | 64.9 | 143 | 5,778 | 1,094 |
SLG-13 | 52.2 | 155 | 6,566 | 1,022 |
SLG-14 | 51.1 | 57 | 2,806 | 735 |
SLG-15 | 34.5 | 32 | 1,676 | 430 |
SLG-16 | 33.3 | 47 | 1,468 | 443 |
SLG-17 | 32.4 | 40 | 1,612 | 549 |
SLG-18 | 26.6 | 28 | 1,616 | 478 |
SLG-19 | 20.6 | 13 | 1,499 | 416 |
SLG-20 | 19.4 | 42 | 2,175 | 461 |
Sub total | 1629.9 | 4,214 | 174,639 | 33,248 |