Table 9.
Conversion of SNP markers and InDel markers arising from marker mining on scaffold84773 into sequence-specific PCR markers in Lupinus angustifolius
Marker name | Primers | Primer sequence (5′-3′) |
---|---|---|
SNP 20 | SNP20F | GTCCCTGCCATTATTAATAGTTACT |
SNP20R | CATCATGAGTCAATTTACCACTTA | |
SNP 25 | SNP25F | GTCACTAATTTTATCTTTGCAAGA |
SNP25R | GATCATAAGAATAATAATAATAATTTGGT | |
SNP 250 | SNP250F | GACTTAGTAATGTGCAACAAGAG |
SNP250R | CTGACACTACAGGTTCGCCT | |
SNP 263 | SNP263F | GGAACATTGTGATTCAGTCACC |
SNP263R | GATAGGTTTGTTGCAATAAGCG | |
SNP264 | SNP264F | GTTTCTTAGTTGCATAGTTGCAA |
SNP264R | CAAAACATTCATAAGTAACAAGG | |
SNP271 | SNP271F | CGACACCATCTGATATATGAAAATAA |
SNP271R | ACCGGAAATCTGTGTTTTTC | |
InDel2 | InDel2F | GATAAAGTATATCTAAATTATGTTTGC |
InDel2R | CTATATTTTGTATCAATTATAACAAATT | |
InDel10 | InDel10F | GTTAAGTGGTAAATTGACTCATG |
InDel10R | GTTTTRCATTCTTGCAAAGATAAAATTAG | |
InDel28 | InDel28F | CTACAATAGCCACACAAATAG |
InDel28R | GTTTAGATGGCCMTGTGC | |
InDel66 | InDel66F | CTTCTGAGTTGGACCATAAAC |
InDel66R | ACTCACATTTACAGAACTTTAACT |