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. 2015 Sep 2;10(9):e0137043. doi: 10.1371/journal.pone.0137043

Table 3. qPCR analysis of human podocyte gene expression: Verification of selected microarray results.

Gene Symbol Gene Title PAN+MeOH vs. MeOH PAN+EV vs. PAN+MeOH Function
    FC p-value FC Array* FC p-value FC Array*  
COL4A3 Collagen, type IV, alpha 3 -1.3 ns -4.8 2.6 0.002 3.3 extracellular matrix composition
DCDC2 Doublecortin domain containing 2 -3.9 0.001 -6.6 2.4 0.004 2.3 cytoskeletal organization / stability, migration
FN1 Fibronectin 1 -2.0 0.03 -1.8 -1.0 ns 1.5 adhesion, migration
LPXN Leupaxin 5.6 0.01 2.4 -2.2 0.03 -2.2 adhesion, migration
MMP24 Matrix metallopeptidase 24 -1.6 0.01 -2.4 3.0 ns 1.6 migration
MYLIP Myosin regulatory light chain interacting protein 15.7 0.01 5.3 -2.3 0.04 -2.6 cytoskeletal organization / stability
MYO5C Myosin VC -4.1 0.002 -5.8 2.8 0.009 2.3 cytoskeletal organization / stability
NRG1 Neuregulin 1 -1.6 ns -3.2 1.2 ns 2.1 adhesion
PCDH10 Protocadherin 10 71.1 0.009 13.9 -4.6 0.01 -4.9 adhesion
PCDH17 Protocadherin 17 371.4 0.005 17.7 -12.0 0.006 -10.5 adhesion
PCDH9 Protocadherin 9 32.7 0.02 9.5 -6.7 0.02 -5.7 adhesion
SYNPO2 Synaptopodin 2 1.9 ns 2.1 -2.4 0.04 -3.0 cytoskeletal organization / stability
TGFB1I1 Transforming growth factor beta 1 induced transcript 1 -1.7 0.05 -5.1 2.9 0.008 2.0 adhesion
THBS1 Thrombospondin 1 -10.8 0.0003 -13.5 2.5 0.03 2.5 adhesion
TUBA1A Tubulin, alpha 1a -3.8 0.0001 -2.9 1.6 0.03 2.0 cytoskeletal organization / stability
TUBB Tubulin, beta class I -3.9 0.0007 -5.5 2.2 0.004 2.0 cytoskeletal organization / stability
TUBB2B tubulin, beta 2B class 2b -13.5 0.00008 -19.0 5.8 0.003 4.2 cytoskeletal organization / stability

PAN = puromycin aminonucleoside. EV = everolimus. MeOH = methanol, solvent for EV. p = p-value. FC = fold change.

* = p < 0.05.