Primers for Pyrosequencing.
| Target | Primer sequences | Position Refseq (NCBI) |
|---|---|---|
| CDH1 | Hs_CDH1_02_PMPyroMarkCPGassay PM00171948 | chr16: 68772100-68772129 |
| CDKN2B | Hs_CDKN2B_01_PMPyroMarkCPGassay PM00039893 | chr9: 22008945-22008981 |
| LINE-1 | sense 5ʹ-GGGTTTATTTTATTAGGGAGTGTTAGAT-3ʹ reverse-biotin 5ʹ-AAAAAAACTCCCTAACCCCTTAC-3ʹ sequencing 5ʹ-AGTGGGAGTAGGTTAGT-3ʹ |
Repeated sequences |
| AluSc | sense 5ʹ-AGAGATAGAGATTATTTTGGTTAATATGG-3ʹ reverse-biotin 5ʹ-AATTCAAACCATTCTCCTACCTCAAC-3ʹ sequencing 5ʹ-ATTAAAAATATAAAAATTAGTTGG-3ʹ |
Repeated sequences |
| TP73 | Hs_TP73_02_PMPyroMarkCPGassay PM00084868 | chr1: 3607097-3607129 |
Localization of the primers is reported in Supplementary Figures S8, S10 and S11.