Table 2.
The 27 identified significant proteins of core network marker in both early-stage and late-stage liver cancer (intersection).
Common network marker of early-stage and late-stage liver cancer | |||||
---|---|---|---|---|---|
Protein | CRV | p value | Cancer_AvgExp | Control_AvgExp | log2FC |
APP | 46.52 | 0.00001 | 13724 | 14041 | −0.03 |
APP | 13.87 | 0.00066 | 15083 | 14041 | 0.1 |
ELAVL1 | 22.99 | 0.00033 | 1725 | 1319 | 0.39 |
ELAVL1 | 29.69 | 0.00003 | 1791 | 1319 | 0.44 |
KRTAP10-5 | 14.73 | 0.00098 | 1 | 1 | 0.04 |
KRTAP10-5 | 20.54 | 0.00022 | 1 | 1 | 0.06 |
H2AFX | 14.08 | 0.00105 | 608 | 271 | 1.17 |
H2AFX | 15.43 | 0.00053 | 806 | 271 | 1.58 |
CDK1 | 13.69 | 0.00108 | 335 | 34 | 3.32 |
CDK1 | 10.31 | 0.00119 | 596 | 34 | 4.15 |
ESR1 | 12.81 | 0.00119 | 228 | 1537 | −2.76 |
ESR1 | 34.1 | 0.00000 | 245 | 1537 | −2.65 |
EZH2 | 12.22 | 0.00127 | 310 | 49 | 2.66 |
EZH2 | 19.05 | 0.00027 | 394 | 49 | 3 |
CEP250 | 12.05 | 0.00130 | 716 | 268 | 1.42 |
CEP250 | 16.12 | 0.00045 | 627 | 268 | 1.23 |
AURKB | 11.41 | 0.00138 | 141 | 14 | 3.35 |
AURKB | 7.68 | 0.00289 | 199 | 14 | 3.85 |
CDC20 | 10.89 | 0.00152 | 359 | 20 | 4.17 |
CDC20 | 8.94 | 0.00168 | 688 | 20 | 5.11 |
E2F1 | 10.54 | 0.00158 | 476 | 43 | 3.46 |
E2F1 | 8.85 | 0.00174 | 673 | 43 | 3.95 |
OTX1 | 10.29 | 0.00166 | 31 | 2 | 4.27 |
OTX1 | 6.25 | 0.00811 | 26 | 2 | 4.02 |
SUMO1 | 9.86 | 0.00181 | 2422 | 2982 | −0.3 |
SUMO1 | 8.63 | 0.00188 | 2624 | 2982 | −0.18 |
MCM4 | 9.76 | 0.00186 | 1308 | 336 | 1.96 |
MCM4 | 6.76 | 0.00535 | 1327 | 336 | 1.98 |
HGS | 7.96 | 0.00312 | 2504 | 1167 | 1.1 |
HGS | 13.9 | 0.00066 | 2441 | 1167 | 1.06 |
KPNA2 | 7.86 | 0.00323 | 1927 | 689 | 1.48 |
KPNA2 | 10.43 | 0.00116 | 2533 | 689 | 1.88 |
UBC | 7.85 | 0.00323 | 34388 | 35490 | −0.05 |
UBC | 6.63 | 0.00591 | 36931 | 35490 | 0.06 |
SPRY2 | 7.5 | 0.00376 | 409 | 989 | −1.27 |
SPRY2 | 7.17 | 0.00399 | 328 | 989 | −1.59 |
TOPBP1 | 7.33 | 0.00406 | 799 | 346 | 1.21 |
TOPBP1 | 6.45 | 0.00698 | 875 | 346 | 1.34 |
SIRT7 | 7.11 | 0.00456 | 442 | 225 | 0.98 |
SIRT7 | 24 | 0.00012 | 456 | 225 | 1.02 |
WHSC1 | 6.67 | 0.00590 | 1217 | 447 | 1.44 |
WHSC1 | 12.06 | 0.00086 | 1369 | 447 | 1.61 |
MCM2 | 6.45 | 0.00666 | 1097 | 174 | 2.66 |
MCM2 | 8.48 | 0.00200 | 1351 | 174 | 2.96 |
AURKA | 6.4 | 0.00685 | 570 | 86 | 2.73 |
AURKA | 9.25 | 0.00154 | 516 | 86 | 2.58 |
COPS5 | 6.39 | 0.00691 | 1506 | 1184 | 0.35 |
COPS5 | 10 | 0.00128 | 1708 | 1184 | 0.53 |
PCNA | 6.29 | 0.00749 | 1652 | 904 | 0.87 |
PCNA | 15.95 | 0.00046 | 2290 | 904 | 1.34 |
BUB1B | 6.27 | 0.00762 | 179 | 12 | 3.89 |
BUB1B | 7.47 | 0.00327 | 320 | 12 | 4.73 |
DNMT1 | 6.02 | 0.00920 | 1376 | 455 | 1.6 |
DNMT1 | 10.63 | 0.00110 | 1383 | 455 | 1.6 |
There are two rows with same proteins name while the upper row represents the early stage liver cancer and the lower raw represents the late stage liver cancer.
AvgExp means average expression.
log2FC means log2 fold change.