Table 4.
Species | PCP (%)a |
---|---|
Bacillus cereus | 40.17 |
Campylobacter jejuni | 71.84 |
Clostridium botulinum | 51.79 |
Corynebacterium diphtheriae | 47.47 |
Corynebacterium pseudotuberculosisb | 96.74 |
Eschirechia coli–Shigella | 44.67 |
Francisella tularensisb | 95.00 |
Haemophilus influenzae | 75.30 |
Listeria monocytogenes | 39.07 |
MTBCb | 84.56 |
Neisseria meningitidis | 60.99 |
Pseudomonas aeruginosa | 37.67 |
Streptococcus pneumoniae | 71.49 |
Yersinia pestisb | 67.56 |
aThe PCP metric was calculated by focusing on pangenes found, at the protein level, in 75% or more of strains within each species, but not in all strains of that species. PCP was calculated as the proportion of genomes from which such a pangene was absent at the protein level, but was still found at the DNA level.
bClonal species.