Table 2.
wAna and Mitochondrial Genome Variation
| wAna Status | N | Analyzed Sites | Fixed | STOTAL | SSINGL | SHET | π | INDELTotal | INDELHOM | INDELHET |
|---|---|---|---|---|---|---|---|---|---|---|
| wAna genomes | ||||||||||
| wAnaINF | 8 | 1,194,063 | 10 | 125 | 39 | 8 | 3.65E-05 | 10 | 6 | 4 |
| wAnaITG | 7 | 1,228,381 | 42 | 2,259 | 25 | 2,234 | NA | 122 | 8 | 114 |
| mtDNA genomes | ||||||||||
| Total | 15 | 14,905 | 5 | 165 | 59 | 11 | 2.84E-03 | 0 | — | — |
| wAnaINF | 8 | 14,905 | 5 | 127 | 34 | 11 | 3.02E-03 | 0 | — | — |
| wAnaITG | 7 | 14,905 | 25 | 109 | 67 | 0 | 2.45E-03 | 0 | — | — |
Note.—N, sample size; STOTAL and INDELTotal, total number of polymorphic sites with a single nucleotide and small sized INDEL (<100 bp) variants, respectively; SSINGL, total number of singletons; SHET and INDELHET, total number of polymorphic sites with at least one line with a heterozygote variant call (PSHET), respectively; π, number of pairwise differences per site; NA, not applicable as there were many heterozygous polymorphisms that appear due to the multicopy nature of the wAnaITG genome (see Results).