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. 2015 Sep 3;16(1):672. doi: 10.1186/s12864-015-1875-8

Table 1.

GO terms related to neurological, epigenetic, and developmental processes from cluster analysis in intermediate stringency

Neurological Expected Observed p-value (fdr) Enrichment
 Neurological system process 616.197 485 2.86E-13 down
 Neurogenesis 332.402 396 7.11E-06 up
 Neuron projection 190.242 237 1.74E-05 up
 Generation of neurons 309.405 366 4.80E-05 up
 Neuron differentiation 281.183 333 0.000109238 up
 Axon 91.4627 117 0.00142957 up
 Cell morphogenesis involved in neuron differentiation 124.389 151 0.00563766 up
 Neuron projection morphogenesis 127.525 154 0.00684608 up
 Glial cell differentiation 39.721 53 0.0202685 up
 Regulation of neuron differentiation 93.0307 113 0.0215321 up
 Gliogenesis 46.5153 60 0.0317942 up
 Regulation of neurogenesis 113.414 134 0.0340942 up
Epigenetic Expected Observed p-value (fdr) Enrichment
 Protein amino acid methylation 25.0869 35 0.0332904 up
 Lysine N-methyltransferase activity 18.8152 27 0.0455873 up
 Protein-lysine N-methyltransferase activity 18.8152 27 0.0455873 up
 Histone-lysine N-methyltransferase activity 18.8152 27 0.0455873 up
 N-methyltransferase activity 29.7907 40 0.0461752 up
 Histone H2A acetylation 6.27173 11 0.0496797 up
Development Expected Observed p-value (fdr) Enrichment
 Sensory perception of smell 189.197 33 1.42E-66 down
 Sensory perception of chemical stimulus 209.58 50 3.33E-61 down
 Sensory perception 389.37 253 6.42E-22 down
 Developmental process 1748.24 1912 1.16E-08 up
 System development 1318.63 1463 2.08E-08 up
 Anatomical structure development 1460.79 1608 4.39E-08 up
 Multicellular organismal development 1593.54 1744 6.81E-08 up
 Nervous system development 603.131 699 1.78E-07 up
 Regulation of developmental process 413.934 494 1.94E-07 up
 Positive regulation of developmental process 182.925 236 3.04E-07 up
 Neuron development 205.399 249 0.000157004 up
 Forebrain development 90.4174 118 0.000419088 up
 Central nervous system development 239.371 282 0.000802517 up
 Neuron projection development 166.723 200 0.00211809 up
 Sensory organ development 129.093 154 0.0128753 up
 Regulation of nervous system development 123.344 146 0.0233886 up
 Brain development 163.588 189 0.0279154 up
 Post-embryonic development 33.4492 45 0.0307565 up
 Regulation of neuron projection development 56.4456 71 0.0355767 up
 Embryonic development 321.949 354 0.0476929 up