Table 5. Classification of 464 mutations identified by exon capture.

Mutation type	Number	%
5' UTR	18	3.9%
Start codon gained in 5' UTR	4	0.9%
Non-sense (stop gained)	8	1.7%
Mis-sense	166	35.8%
Splice acceptor	1	0.2%
Splice donor	3	0.6%
Start codon lost	1	0.2%
Synonymous	110	23.7%
Intron	60	12.9%
3' UTR	19	4.1%
Intergenic	74	15.9%
Total	464	100.0%

Mutations across lines A6, C6 and D3 with a minimum variant read coverage of 8 and an allele frequency >0.1, classified by SnpEff.