Table 1.
Distribution of genes for selected proteins and groups of cellular functions among fosmids
| Fosmid | Chitinolytic enzyme | Chitin deacetylase | Carbohydrate metabolisma | Hydrolaseb | Transferase | Aldolase | Oxidoreductase | Dehydrogenase | Decarboxylase | ABC sugar –transporterc | Efflux transporters | Chemotaxis transducer | Transcriptional regulator | DNA replication | Periplasmic nucleotide binding protein | Membrane protein | Chaperonin | DNA repair | Non-ribosomal synthetase | Antibiotic resistance/synthesis | Plasmid-partitioning protein | Transposase/integrase | Hypothetical | Unknown |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14A | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 1 | 6 | 0 |
| 22G3 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 1 | 0 | 0 | 2 | 1 | 1 | 1 | 0 | 0 | 0 | 7 | 1 |
| 28C5 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 3 | 2 | 1 | 4 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 14 | 0 |
| 53D1 | 1 | 0 | 0 | 2 | 0 | 0 | 0 | 2 | 0 | 3 | 2 | 0 | 3 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 0 | 2 | 11 | 1 |
| 101 F8 | 2 | 1 | 2 | 1 | 3 | 0 | 1 | 0 | 1 | 0 | 6 | 0 | 2 | 3 | 1 | 3 | 0 | 0 | 3 | 2 | 0 | 0 | 9 | 0 |
aOther than genes forchitinolytic enzymes and chitinolytic enzyme like sequences
bOther than genes for carbohydrate hydrolase
c N-acetyl-d-glucosamine ABC transport system and ABC-type sugar transport component