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. 2015 Sep;25(9):1360–1371. doi: 10.1101/gr.189803.115

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© 2015 Harris et al.; Published by Cold Spring Harbor Laboratory Press

This article, published in Genome Research, is available under a Creative Commons License (Attribution 4.0 International), as described at http://creativecommons.org/licenses/by/4.0/.

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Figure 5. — Convergent deletion of the equibactin locus in seven isolates recovered from four independent persistently infected horses. (A) A representation of the genome annotation around the equibactin cluster. (B) Read mapping of the equibactin locus in example isolates exhibiting the four deletion variants. Names to the right of the plots indicate isolates exhibiting the same deletion. Isolate names in bold are the examples used for the mapping plot. Read mapping drops to zero in the gray repeat region due to an inability to map reads uniquely to this region.