Table 2.
Network file (.zginml) | |V | | Steady | Cyclic | Faithful | Univocal | Complete |
---|---|---|---|---|---|---|
buddingYeastOrlando2008 | 9 | 1 | – | 0.08s | 0.03s | 0.23s |
fissionYeastDavidich2008 | 10 | 12 | – | 0.01s | 0.02s | 0.08s |
boolean_cell_cycle | 10 | 1 | 1 | 0.03s | 0.19s | 0.12s |
Toll_Pathway_12Jun2013 | 11 | 4 | – | 0.01s | 0.01s | 0.09s |
drosophilaCellCycleVariants | 14 | 1 | – | 0.01s | 0.05s | 0.11s |
MAPK_red3_19062013 | 16 | 12 | 6 | 0.15s | 1.11s | 0.93s |
MAPK_red1_19062013 | 17 | 12 | 6 | 0.18s | 1.25s | 0.87s |
VEGF_Pathway_12Jun2013_0 | 18 | 256 | – | 0.04s | 0.05s | 0.28s |
MAPK_red2_19062013 | 18 | 12 | 6 | 0.14s | 1.26s | 0.67s |
buddingYeastIrons2009 | 18 | – | 1 | 0.16s | 0.48s | 0.02s |
ErbB2_model | 20 | 1 | – | 0.08s | 0.00s | 0.02s |
FGF_Pathway_12Jun2013 | 23 | 512 | – | 0.09s | 0.09s | 0.51s |
Hh---Pathway_11Jun2013_0 | 24 | 8192 | – | 1.29s | 1.43s | 6.34s |
Spz---Processing_12Jun2013 | 24 | 64 | – | 0.04s | 0.03s | 0.22s |
Wg_Pathway_11Jun2013 | 26 | 16384 | – | 2.38s | 2.38s | 17.16s |
TCRsig40 | 40 | 7 | 1 | 1.07s | 3.34s | 0.12s |
MAPK_large_19june2013 | 53 | 12 | 6 | 40.15s | 565.84s | 20.72s |
T_LGL | 60 | 86 | 70 | 1.07s | 6.57s | 5669.57s |
The number of variables, steady states, and cyclic attractors are recorded in the first three columns. The remaining three columns record the time needed to confirm faithfulness, univocality, and completeness.