Table 2.
Transition transversion ratio in different variant calling approaches
| Approach | LifeScope | LifeScope-GATK | MAQ-GATK | SHRiMP-GATK | BFAST-GATK |
|---|---|---|---|---|---|
| Ti/Tv | 2.62 | 2.45 | 2.59 | 2.3 | 2.68 |
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