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. 2015 Sep 9;6:278. doi: 10.3389/fgene.2015.00278

Table 1.

Characteristics of studied SNPs.

SNP Chr region Base position Gene Minor/major alleles Function MAF
rs2247421 1q41 221406312 G/T 0.349
rs4140967 1q41 221418246 G/C 0.312
rs10776482 4p14 38451180 TLR10 C/T coding-synonymous 0.147
rs7694115 4p14 38455489 TLR10 G/A intron 0.382
rs7660429 4p14 38458876 TLR10 G/C intron 0.251
rs12233670 4p14 38463611 T/C 0.138
rs10005625 4p14 38471547 T/C 0.003
rs5743828 4p14 38503915 TLR6 A/G near-gene-3 (failed) 0.185
rs5743810 4p14 38506745 TLR6 T/C missense (Ser249Pro) 0.385
rs6531668 4p14 38509990 A/G 0.428
rs6531670 4p14 38511417 C/T 0.441
rs1992253 4q31.3 154822378 T/C 0.031
rs4585282 4q31.3 154832096 TLR2 T/C intron 0.01
rs7694512 4q31.3 154837310 TLR2 T/G intron 0.362
rs13123230 4q31.3 154840035 TLR2 G/A intron 0.388
rs1339 4q31.3 154851013 RNF175 G/A missense (Met195Ile) 0.261
rs2289318 4q31.3 154853184 RNF175 C/G intron 0.255
rs11721827 4q35.1 187228131 TLR3 C/A intron 0.198
rs6552950 4q35.1 187231850 TLR3 G/A intron 0.253
rs4608848 4q35.1 187247098 C/T 0.383
rs1519309 4q35.1 187252083 G/A 0.298
rs10759932 9q33.1 119504965 TLR4 C/T near-gene-5 0.196
rs5030728 9q33.1 119514103 TLR4 A/G intron 0.269
rs5935436 Xp22.2 12793812 TLR7 T/C near-gene-5 0.069
rs179020 Xp22.2 12799778 TLR7 T/C intron 0.26
rs179013 Xp22.2 12811392 TLR7 T/C intron 0.266
rs179008 Xp22.2 12813580 TLR7 T/A missense (Leu11Gln) 0.279
rs10127190 Xp22.2 12816916 TLR7 A/T UTR-3 0.004
rs850632 Xp22.2 12819487 C/T 0.264
rs179003 Xp22.2 12823862 G/T 0.196

MAF, minor allele frequency among vitiligo patients and healthy controls.

RNF175, ring finger protein 175.