Table 2.
Highly-abundant bacterial species under different disease conditions
| Disease | Name of prevalent bacteria | Ref. |
|---|---|---|
| Symptomatic atherosclerosis | Escherichia coli | [42] |
| Eubacterium rectale | ||
| Eubacterium siraeum | ||
| Faecalibacterium prausnitzii | ||
| Ruminococcus bromii | ||
| Ruminococcus sp. 5_1_39BFAA | ||
| Type 2 diabetes | Akkermansia muciniphila | [49] |
| Bacteroides intestinalis | ||
| Bacteroides sp. 20_3 | ||
| Clostridium bolteae | ||
| Clostridium ramosum | ||
| Clostridium sp. HGF2 | ||
| Clostridium symbiosum | ||
| Colstridium hathewayi | ||
| Desulfovibrio sp. 3_1_syn3 | ||
| Eggerthella lenta | ||
| Escherichia coli | ||
| Obesity/IBD/CD | Acidimicrobidae ellin 7143 | [50] |
| Actinobacterium GWS-BW-H99 | ||
| Actinomyces oxydans | ||
| Bacillus licheniformis | ||
| Drinking water bacterium Y7 | ||
| Gamma proteobacterium DD103 | ||
| Nocardioides sp. NS/27 | ||
| Novosphingobium sp. K39 | ||
| Pseudomonas straminea | ||
| Sphingomonas sp. AO1 | ||
| Colorectal cancer | Acinetobacter johnsonii | [47,51–53] |
| Anaerococcus murdochii | ||
| Bacteroides fragilis | ||
| Bacteroides vulgatus | ||
| Butyrate-producing bacterium A2-166 | ||
| Dialister pneumosintes | ||
| Enterococcus faecalis | ||
| Fusobacterium nucleatum E9_12 | ||
| Fusobacterium periodonticum | ||
| Gemella morbillorum | ||
| Lachnospira pectinoschiza | ||
| Parvimonas micra ATCC 33270 | ||
| Peptostreptococcus stomatis | ||
| Shigella sonnei | ||
Note: IBD, inflammatory bowel disease; CD, Crohn’s disease.