A, Quantified Kac site overlap for three biological replicates. B, Kac protein overlap for three biological replicates.
C, Scatter plots, histograms, and Pearson correlation values for Kac sites after 2 μm SAHA treatment (16 h) versus DMSO for three biological replicates. The plot shows normalized log2 SILAC ratios. Points colored in red were deemed regulated using a moderated t-statistic (p < 0.01). Points colored in black were deemed not reproducibly regulated.