Table 2.
General features of three Xanthomonas species, X. axonopodis pv. poinsettiicola (XAP), X. hyacinthi (XH) and X. campestris pv. zantedeschiae (XCZ)
| Attribute | XAP | XH | XCZ |
|---|---|---|---|
| Genome size (bp) | 5,094,606 | 4,290,973 | 5,64,3059 |
| DNA coding region (bp) | 4,289,430 | 3,635,686 | 4,478,823 |
| DNA G + C number of bases | 64.77% | 67.42% | 64.52% |
| Total number of genes | 5,287 | 4,459 | 8,090 |
| Protein coding genes | 5,221 | 4,395 | 7,986 |
| RNA genes | 66 | 64 | 104 |
| rRNA genes | 4 | 3 | 11 |
| tRNA genes | 53 | 51 | 73 |
| Protein coding genes with predicted function | 3,868 | 3,318 | 4,754 |
| CDS assigned to COGsa | 2,412 | 2,147 | 1,547 |
| CDS assigned to KOGsb | 652 | 593 | 333 |
| CDS with signal peptides | 585 | 452 | 502 |
| Genes coding for transmembrane proteins | 1,072 | 908 | 1,344 |
a)
CDS; coding sequences, COG; clusters of orthologous group
b)
KOG; eukaryotic orthologous group