Table 5. The specifications of four systems used for molecular dynamics simulations.
| No | System | No of TIP3P water molecules | No of Na+ counter ions | System size (nm) |
|---|---|---|---|---|
| 1 | AKR1B10+NADPH+inhibitora | 14275 | 4 | 5.574×4.725×5.815 |
| 2 | AKR1B10+NADPH+hit 1 | 14270 | 4 | 5.574×4.725×5.815 |
| 3 | AKR1B10+NADPH+hit 2 | 14271 | 4 | 5.574×4.725×5.815 |
| 4 | AKR1B10+NADPH+hit 3 | 14271 | 4 | 5.574×4.725×5.815 |
a Reference inhibitor; the most active compound in the training set, 7-hydroxy-2-(4-methoxyphenylimino)-2H-chromene-3-carboxylic acid benzylamide.