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. 2015 Sep 11;6:726. doi: 10.3389/fpls.2015.00726

Table 5.

Expression patterns of DEGs related to hormone metabolism and transcription factors.

GeneID Ratio of FPKM (TC/TM) Probability Gene description
HORMONE METABOLISM AND SIGNALING-RELATED GENE EXPRESSION
Solycg049530.2.1 5.60 0.832236801 1-aminocyclopropane-1-carboxylate oxidase
Solycg026650.2.1 15.26 0.819387202 1-aminocyclopropane-1-carboxylate oxidase
Solyc12g006380.1.1 6.18 0.891739454 1-aminocyclopropane-1-carboxylate oxidase-like protein
Solyc09g089580.2.1 5.88 0.826911685 1-aminocyclopropane-1-carboxylate oxidase-like protein
Solyc04g009860.2.1 3.05 0.822418422 1-aminocyclopropane-1-carboxylate oxidase-like protein
Solyc01g095080.2.1 13.46 0.894367351 1-aminocyclopropane-1-carboxylate synthase
Solyc06g053710.2.1 4.65 0.831587704 Ethylene receptor
Solyc08g014000.2.1 0.42 0.804476878 Lipoxygenase
Solyc08g029000.2.1 3.90 0.824378316 Lipoxygenase
Solyc03g122340.2.1 4.12 0.810173807 Lipoxygenase
Solyc12g013620.1.1 4.87 0.874434403 NAC domain protein IPR003441(jasmonic acid 2)
Solyc03g071870.1.1 20.49 0.844008772 Phenylalanine ammonia-lyase
Solyc10g011920.1.1 5.99 0.863015339 Phenylalanine ammonia-lyase
Solyc10g011930.1.1 10.15 0.906945967 Phenylalanine ammonia-lyase
Solyc00g282510.1.1 7.30 0.898564424 Phenylalanine ammonia-lyase
Solyc09g007910.2.1 3.38 0.814515824 Phenylalanine ammonia-lyase
Solyc08g062220.2.1 5.94 0.843693677 UDP-glucose salicylic acid glucosyltransferase
Solyc08g006330.2.1 2.93 0.800727241 UDP-glucose salicylic acid glucosyltransferase
Solyc11g007490.1.1 5.85 0.875783013 UDP-glucose salicylic acid glucosyltransferase
Solyc11g007500.1.1 4.94 0.884372519 UDP-glucose salicylic acid glucosyltransferase
Solyc03g078490.2.1 6.36 0.845697685 UDP-glucose salicylic acid glucosyltransferase
TRANSCRIPTION FACTORS
Solyc09g005610.2.1 9.00 0.886849170 BZIP transcription factor TGA2-like
Solyc02g080890.2.1 3.09 0.829923999 Transcription factor WRKY31 isoform X1)
Solyc02g094270.1.1 4.05 0.817843234 WRKY transcription factor 45
Solyc06g066370.2.1 2.68 0.817320175 WRKY transcription factor 1
Solycg05g015850.2.1 6.76 0.846970671 WRKY transcription factor-b
Solyc09g014990.2.1 3.13 0.803871895 WRKY-like transcription factor 26
Solyc09g089930.1.1 4.32 0.816948362 Ethylene responsive transcription factor 1a
Solyc12g056590.1.1 3.80 0.816948362 Ethylene responsive transcription factor 2a
Solyc04g071770.2.1 4.32 0.833591712 Ethylene responsive transcription factor 2a
Solyc09g075420.2.1 4.61 0.864439571 Ethylene responsive transcription factor 2b
Solyc09g091950.1.1 0.34 0.875776711 Ethylene-responsive transcription factor 1
Solyc02g077370.1.1 3.75 0.810993055 Ethylene-responsive transcription factor 2
Solyc01g104740.2.1 6.49 0.887132756 Ethylene-responsive transcriptional coactivator
Solyc10g008700.1.1 6.47 0.818990182 MYB transcription factor
Solyc09g090790.2.1 4.79 0.848502036 MYB transcription factor
Solyc12g099130.1.1 6.62 0.807974439 MYB transcription factor
Solyc02g089190.1.1 8.78 0.822746121 MYB transcription factor
Solyc03g093890.2.1 4.18 0.826130248 Myb-related transcription factor
Solyc02g089190.1.1 3.13 0.817843234 Susceptibility homeodomain transcription factor
Solyc03g093890.2.1 4.00 0.830094151 Sigma factor binding protein 1
Solycg05g054650.1.1 4.09 0.821567664 Zinc finger transcription factor ZFP19
Solyc01g096510.2.1 2.67 0.817206741 Zinc finger AN1 domain-containing stress-associated protein
Solyc02g087210.2.1 4.30 0.876198939 Zinc finger family protein C2H2-type)
Solycg05g054650.1.1 4.09 0.821567664 Zinc finger transcription factor ZFP19

Probability ≥ 0.8 and the absolute value of Ratio ≥ 2 as the threshold to judge the significance of gene expression difference. FPKM represents the expression level.