TABLE 1.
AHSV serotype | Original isolate | Isolate no. or yr of isolation | Passage levela | Origin | Accession no. |
---|---|---|---|---|---|
History of the current OIE reference strains of African horse sickness virus used at ARC-OVI | |||||
1 | HS 61/61b | HS 29/62c | 2S | Nelspruit, South Africa | KF859986 –KF859995 |
2 | Unknown | HS 82/61c | 3S | South Africa | KF859996–KF860005 |
3 | HS 13/63c | 4S | Malmesbury, South Africa | KM886354–KM886363 | |
4 | HS 47/58 (Specimen 341) | HS 32/62c | 1S | Zimbabwe | KM609465–KM609474 |
5 | FR (Fourie) | HS 30/62c | 2S | South Africa | KM886344–KM886353 |
6 | HS 09/58 (Mule 3858) | HS 39/63 | 1S | Kaalplaas, South Africa | KF860006–KF860015 |
6 | HS 02/75c | 4S | South Africa | KP009741–KP009750 | |
7 | HS 59/61 | HS 31/62c | 2S | Kaalplaas, South Africa | KF860016–KF860025 |
8 | HS 10/62c | 2S | Kenya | KF860026–KF860035 | |
9 | HS 90/61 | 4S | Chad (Fort Lamy) | KF860036–KF860045 | |
History of recent field isolates of African horse sickness virus | |||||
1 | HS 21/07 | Unknown | South Africa | KP009621–KP009630 | |
2 | HS 90/07 | 2Vero | South Africa | KP009631–KP009640 | |
3 | HS 73/08 | Unknown | South Africa | KP009641–KP009650 | |
4 | HS 128/06 | 1Vero | South Africa | KP009651–KP009660 | |
5 | HS 28/08 | Unknown | South Africa | KP009661−KP009670 | |
6 | HS 04/08 | Unknown | South Africa | KP009671−KP009680 | |
7 | HS 23/08 | Unknown | South Africa | KP009681−KP009690 | |
8 | HS 29/00 | 1S,5BHK | South Africa | KP009691−KP009700 | |
8 | HS 83/04 | 3Vero,1BHK | South Africa | KP009721−KP009730 | |
9 | HS 27/08 | Unknown | South Africa | KP009701−KP009710 | |
9 | HS 72/08 | Unknown | South Africa | KP009731−KP009740 | |
9 | HS145/09 | Unknown | South Africa | KP033466−KP033475 | |
History of the historic neurotropic strains of African horse sickness virus | |||||
1 | 1180 | 1933 | 100+ in adult mice | South Africa | KP009711−KP009720 |
3 | L | 1940 | 100+ in adult mice | Ladysmith, South Africa | KP009761−KP009770 |
4 | Vryheid | 1938 | 100+ in adult mice | Vryheid, South Africa | KP009771−KP009780 |
5 | Westerman | 1936 | 100+ in adult mice | South Africa | KP009781−KP009790 |
7 | Karen | 1952 | 100+ in adult mice | Kabete, Kenya | KP009751−KP009760 |
The passage level refers to the final passage number before dsRNA extraction and sequencing.
The number after the / indicates the year of the original isolate and the number before the / indicates the number of the isolate during the particular year.