Table 1.

Summary of sequence assembly after illumina sequencing

Sample name	Raw reads	Clean reads	Clean bases	Error rate (%)	Q20 (%)	Q30 (%)	GC content (%)
CdR_0	29891825	27957220	2.8G	0.04	96.21	88.26	51.29
CdS_0	29972660	27820617	2.78G	0.04	96.10	88.01	52.05
CdRCA_24	28507931	26729903	2.67G	0.04	96.55	89.09	53.10
CdSCA_24	32425088	30488049	3.05G	0.04	96.66	89.45	52.83
CdRCA_48	34416149	31852813	3.19G	0.06	94.65	85.70	52.91
CdSCA_48	35128459	32712066	3.27G	0.06	94.92	86.22	52.54
CdRNA_4	37227323	34328641	3.43G	0.06	94.83	86.16	52.21
CdSNA_4	42020195	39045618	3.9G	0.05	95.01	86.49	51.81
CdRCA_4	34145893	31628520	3.16G	0.04	94.78	86.06	52.84
CdSCA_4	29324652	27108530	2.71G	0.04	94.95	86.37	52.00