Table 1.
Characteristics of Candidate Genes and Associated SNPs in Sample
| Gene | SNP | Chr | Position | Function | Alleles | N (%) |
|---|---|---|---|---|---|---|
| NTRK3 | rs1435403 | 15q25 | 88437069 | Intron | GG | 55 (47) |
| GA | 45 (12) | |||||
| AA | 12 (10) | |||||
| NTRK3 | rs1110306 | 15q25 | 88680100 | Intron | AA | 24 (21) |
| GA | 52 (45) | |||||
| GG | 28 (24) | |||||
| NTRK3 | rs1369430 | 15q25 | 88430769 | Intron | AA | 42 (36) |
| AG | 56 (48) | |||||
| GG | 15 (13) | |||||
| NTRK3 | rs3784441 | 15q25 | 88451765 | Intron | GG | 58 (50) |
| GA | 46 (40) | |||||
| AA | 12 (10) | |||||
| NTRK3 | rs7180942 | 15q25 | 88674576 | Intron | TT | 29 (25) |
| GT | 60 (52) | |||||
| GG | 24 (21) | |||||
| NTRK3 | rs2059588 | 15q25 | 88678680 | Intron | TT | 29 (25) |
| GT | 55 (47) | |||||
| GG | 25 (22) | |||||
| NTRK3 | rs3784406 | 15q25 | 88685330 | Intron | CC | 34 (29) |
| CT | 58 (50) | |||||
| TT | 21 (18) | |||||
| BDNF | rs6265 | 11p13 | 27679916 | Exonic - missense | GG | 70 (60) |
| GA | 38 (33) | |||||
| AA | 1 (1) | |||||
| SLC6A4 | rs25532 | 17q11.2 | 28564170 | Upstream of gene | CC | 82 (71) |
| CT | 26 (22) | |||||
| TT | 4 (3) | |||||
| COMT | rs4680 | 22q11.21 | 19951271 | Exonic - missense | GG | 30 (26) |
| GA | 54 (47) | |||||
| AA | 30 (26) |
Notes: Chr = chromosome; SNP = Single nucleotide polymorphism.