Table 1.
A list of 33 genes induced in the transgenic line (#10) overexpressing PtrABF in comparison with the wild type, as revealed by microarray analysis, and their promoter information
The listed genes that can be functionally annotated, with a fold change ≥2.0 (P≤0.05), are included.
| Biology function | Probe set ID | Product description | Fold change | Promoters | ||
|---|---|---|---|---|---|---|
| Length (bp) | No. of ABREsa | No. of CEs | ||||
| Signal transduction | Cit.6937.1.S1_at | Calmodulin binding protein-like | 10.6584 | 1631 | 0 | 0 |
| Cit.28233.1.S1 | Calmodulin-binding protein | 9.24319 | 2000 | 1 | 0 | |
| Cit.19911.1.S1_s_at | CML23 | 5.98814 | 2058 | 2 | 2 | |
| Cit.16885.1.S1_at | CML23 | 5.45979 | 2058 | 2 | 2 | |
| Cit.21952.1.S1_at | CES101 | 2.90803 | 1766 | 0 | 0 | |
| Cit.18183.1.S1_at | Calmodulin-binding receptor-like cytoplasmic kinase 2, CRCK2 | 2.6287 | 2664 | 2 | 0 | |
| Cit.15386.1.S1_at | Signalling in sugar and nutrient physiology, GLR2.7 | 2.46976 | 2000 | 1 | 0 | |
| Transcription factors | Cit.12301.1.S1_at | bZIP60 | 2.38001 | 1504 | 2 | 0 |
| Cit.22360.1.S1_at | ANAC068 | 2.5932 | 2000 | 1 | 0 | |
| Cit.29605.1.S1_at | NAC090 | 12.457 | 2029 | 3 | 1 | |
| Cit.29611.1.S1_at | WRKY46 | 5.85275 | 2000 | 1 | 0 | |
| Cit.32848.1.S1_at | ANAC087 | 2.43082 | 2075 | 0 | 0 | |
| Cit.36234.1.S1_s_at | bZIP60 | 2.84623 | 2058 | 0 | 0 | |
| Cit.3757.1.S1_at | WRKY46 | 4.42468 | 2566 | 1 | 1 | |
| Cit.37829.1.S1_s_at | NAC090 | 11.7199 | 2029 | 3 | 1 | |
| Cit.39642.1.S1_at | WRKY50 | 3.45106 | 2180 | 1 | 4 | |
| Oxidative stress and redox regulation | Cit.17340.1.S1_at | Peroxidases | 2.91959 | 2000 | 1 | 2 |
| Cit.22418.1.S1_s_at | Redox thioredoxin | 2.39812 | 2132 | 1 | 1 | |
| Cit.25134.1.S1_at | Respiratory burst oxidase | 2.22697 | 1328 | 1 | 1 | |
| Cit.31330.1.S1_at | Respiratory burst oxidase | 2.97614 | 2000 | 2 | 1 | |
| Response to stimulus and stress | Cit.39178.1.S1_s_at | LEA4-5 | 23.4362 | 1578 | 2 | 1 |
| Cit.17622.1.S1_at | Cold stress protein | 2.13017 | 2000 | 2 | 1 | |
| Cit.14915.1.S1_at | Dehydration-induced protein RD22-like protein 2 | 2.14237 | 2023 | 0 | 0 | |
| Cit.22001.1.S1_at | Disease resistance protein (TIR-NBS-LRR class) | 2.43452 | 2000 | 2 | 1 | |
| Cit.24055.1.S1_at | PR-proteins | 2.23615 | 878 | 1 | 1 | |
| Cit.28635.1.S1_at | Disease resistance protein (TIR-NBS-LRR class) | 3.95718 | 2000 | 2 | 0 | |
| Metabolic process | Cit.4457.1.S1_s_at | Lipid metabolism | 6.76488 | 1988 | 2 | 1 |
| Cit.17318.1.S1_at | RING/U-box superfamily protein | 3.31257 | 1183 | 2 | 1 | |
| Cit.3096.1.S1_s_at | GK-2 | 2.97569 | 2714 | 1 | 1 | |
| Cit.14586.1.S1_at | 2-Oxoglutarate and Fe(II)-dependent oxygenase superfamily protein | 2.45955 | 2000 | 3 | 0 | |
| Cit.17713.1.S1_s_at | Arginine decarboxylase | 2.17115 | 2503 | 1 | 3 | |
| Development | Cit.22036.1.S1_at | Development unspecified | 2.78254 | 2000 | 1 | 1 |
| Transport | Cit.39679.1.S1_s_at | UDP-galactose transporter 2,UTR2 | 2.29242 | 2046 | 0 | 1 |
a The number of ABREs (ABA-responsive elements) and CEs (coupling elements) was examined using the promoter region of the relevant genes based on the citrus genome sequence data.