Table 2. Genes and function of the most highly differential expressed in Albion and Voyager.
| Genotype | Function | Albion a | Voyager a | log2 (Fold Change) b , c |
|---|---|---|---|---|
| Albion | ||||
| Cysteine proteinases | Extracellular proteinase probably having a crucial role during rapid cell growth and leaf expansion | 791 | 203 | -2 |
| MLP-like protein 43 | Associated with fruit and flower development and pathogen defense responses | 732 | 98 | -3 |
| SCR-like 11 | S locus cysteine-rich protein | 392 | 66 | -3 |
| Serine carboxypeptidase-like | Serine-type carboxypeptidase activity involved in proteolysis | 237 | 81 | -2 |
| Aspartic proteinase A1 | Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range | 231 | 76 | -2 |
| Low-molecular-weight cysteine-rich | Predicted to encode a PR (pathogenesis-related) protein. | 215 | 31 | -3 |
| Voyager | ||||
| CCR-like | Cellular cation homeostasis, divalent metal ion transport. Expressed in embryo axis, cotyledons. | 146 | 460 | 2 |
| 2Fe-2S ferredoxin | Abscisic acid biosynthetic process, electron transport chain, pentose-phosphate shunt. | 110 | 295 | 1 |
| Zinc-binding ribosomal protein | DNA recognition, RNA packaging, transcriptional activation, regulation of apoptosis, protein folding and assembly, and lipid binding. | 74 | 169 | 1 |
| Adenine nucleotide alpha hydrolases | Function unknown. Involved in response to stress. Expressed during petal differentiation and expansion stage. | 65 | 162 | 1 |
| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | Function in lipid binding. Located in endomembrane system. Expressed in shoot apex, embryo, flower, leaf, seed. Expressed during cotyledon expansion stage. | 35 | 161 | 2 |
| Basic chitinase | Defense response after wounding or pathogenic attack | 10 | 150 | 4 |
a The value used to compute significance of the observed change of transcript abundance was measured in fragments per kilobase of transcript per million mapped reads (FPKM.)
b Log2 (Fold change): negative values indicate that the gene is more highly expressed in Albion and positive values indicate the gene is more highly expressed in Voyager.
c All genes were significantly differential expressed FDR<0.05