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. 2015 Sep 14;10(9):e0137696. doi: 10.1371/journal.pone.0137696

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© 2015 Brown et al

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.

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Fig 1 — A) System overview of the user interface with RPTS. Input may come from either a published tape archive (.tar) GEO dataset, or directly from a high-throughput sequencing system, such as Affymetrix. Input data may come from multiple sources, RPTS has options the user may set in order to combine data from multiple sources. B) The algorithm of RPTS is described in detail in this panel. General flow of decision points and data analysis are described, key points of decision are highlighted in red-boxes. Output from the program is highlighted in green-boxes, with a description of what is contained.