Table 2.
Sr. no. | Locus name | Sequence 5′–3′ | GC content (%) | Tm | Molecular weight (bp) | No. of loci | No. of polymorphic loci | Percent polymorphism (%) | PIC value |
---|---|---|---|---|---|---|---|---|---|
1 | UBC 443 | ACACACACACACACACACT | 47 | 49 | 453–2,159 | 18 | 17 | 94.44 | 0.909 |
2 | UBC 807 | AGAGAGAGAGAGAGAGT | 47 | 45 | 89–1,556 | 22 | 22 | 100 | 0.930 |
3 | UBC 808 | AGAGAGAGAGAGAGAG(CT)C | 53 | 51 | 604–2,224 | 13 | 12 | 92.30 | 0.892 |
4 | UBC 818 | CACACACACACACAG | 53 | 42 | 342–1,835 | 18 | 17 | 94.44 | 0.915 |
5 | UBC 825 | ACACACACACACACACT | 47 | 45 | 446–2,279 | 20 | 20 | 100 | 0.934 |
6 | UBC 834 | AGAGAGAGAGAGAGAG(CT)T | 47 | 49 | 392–2,597 | 19 | 19 | 100 | 0.934 |
7 | UBC 840 | GAGAGAGAGAGAGAGAYT | 47 | 45 | 222–1,952 | 18 | 18 | 100 | 0.919 |
8 | UBC 841 | GAGAGAGAGAGAGAGAYC | 53 | 47 | 189–2,940 | 22 | 22 | 100 | 0.937 |
9 | UBC 855 | ACACACACACACACACYT | 47 | 45 | 238–2,284 | 15 | 15 | 100 | 0.908 |
10 | ISS RA7 | AGAGAGAGAGAGAGAGAGAGT | 48 | 52 | 254–1,720 | 21 | 21 | 100 | 0.930 |
11 | ISS RA12 | GAGAGAGAGAGACC | 57 | 40 | 225–1,984 | 32 | 31 | 96.88 | 0.943 |
12 | CTC 4RC | CTCCTCCTCCTCRC | 69 | 44 | 307–2,587 | 20 | 20 | 100 | 0.922 |
Total | – | 238 | 234 | – | – | ||||
Average | 313–176 | 19.8 | 19.5 | 98.17 | 0.923 |