Table 4.
Overrepresentation of MIPS categories among the clusters of differentially expressed genes (see Fig. 3)
| Cluster | Functional catagory | Number of genes in cluster | Total number of genes in category | Bonferroni-corrected p-valuea |
|---|---|---|---|---|
| 1 | Ribosome biogenesis | 18 | 343 | 1.68E−2 |
| 2 | Glucose responsive DOWN | 34 | 565 | 5.73E−11 |
| Lipid, fatty acid and isoprenoid metabolism | 20 | 291 | 7.10E−05 | |
| ENERGY | 18 | 360 | 3.77E−02 | |
| 3 | Glucose responsive UP [58] | 44 | 589 | 5.48E−14 |
| 4 | No significant terms | |||
| 5 | No significant terms | |||
| 6 | Glucose responsive UP [58] | 44 | 589 | 1.78E−4 |
aA statistical Bonferroni-corrected p-value threshold for overrepresentation of 0.05 was applied