Table 2.

Genes in Wilhelm et al. [53] list that are neither in our training set nor annotated as synaptic in Drosophila

Rat protein	Drosophila homologue	Initial catalogue	Final catalogue
VGlut 1/2	CG10069	Yes	Yes
Calmodulin	CG8472	Yes	No
NSF	CG31495	Yes	No
AP-2 mu2	CG10637	Yes	Yes
SGIP1	CG8176	Yes	Yes
endophilin II	CG9834	Yes	Yes
Hsc70	CG8937	No	No
PIPK Ig	CG9985	Yes	Yes
Vti1a	CG3279	Yes	No
VAMP4	CG1599	Yes	No
Calbindin	CG6702	No	No

The first column shows the names of the rat proteins whose Drosophila homologues are neither in our training set nor already annotated as synaptic genes in the fly. The second column shows the name of the corresponding Drosophila homologue. The third column indicates whether these Drosophila genes were classified as synaptic with a probability higher than 0.5 by the 3 algorithms. The fourth column indicates if the genes were also classified as synaptic by the 3 algorithms with a probability above 0.9